Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2016 ATGAGAATTTTTGTCTTGTTGAAAGTGTTTCTTTTATTGTTGCATGCTCTTGTTTCAGCACTAAACTCAGATGGGGTTGCACTCTTATCATTCATGAGTCACTGGACATTTATACCACCTTCCATTAACTCAACTTGGTCTTCTTCTCATTCTACACCATGTTCTTCTTGGGTTGGAATTCACTGTAACCATCTTCACCATGTTGTTTCTCTTAACCTCTCTGGTTATAACATTCCTGGTCAATTAGGACCTGAACTTTCATCTTGTACTTTTCTACAATCTATAGACCTTACTTCAAACAACTTTTCAGGCCAAATACCTGAATCCTTCAAAAACCTTTCTAAACTGAACTATCTAAGCCTTTCTTCTAACTATTTGAGTGGTGAAATTCCACTTTCTTTCACTCAAATCCCAAAGTTACAGTTTTTTGATCTCTCTTATAACAGTTTGAGTGGTTATATTCCTACAAATATTGGCAACATGACTCAGCTATTGCAATTGTTTCTTCAAGGTAATAACTTGCATGGTGCAATTCCATCATCTATTGTAAACTGCACTAAGTTACAAGATTTGTACTTGAATGATAATCAGCTTCAGGGTGTTCTTCCTGATACACTTAACAATCTCAATGATCTTGTGTCTTTTGATGTCAGCCACAATAGTCTTAAGGGTACAATTCCATTGGGTTCTTCTAACACTTGTAGTCAAAATCTACAGTTTTTGGATCTATCTTTCAATGTGTTTAGTGGAGGCATTCCTTCAGGCTTAGGAAATTGTAGTGCTTTATCACAATTTGCTTCTGTTGCTTGTAACTTAGATGGAACTATTCCATCTTCCTTTGGTCTACTCACCAAGCTTACAATTCTAAGGCTTCCTGAGAACCATTTATCTGGGAGAATACCTCCTGAGATTGGAAACTGTAAGGCTTTGACAGAGTTACATTTATACTCGAATCGGCTCGAAGGAGAGATTCCTAGTGAACTAGGGAAGTTGAGTGAGCTACAAGACCTTGAATTGTTTTCCAATAAGTTGAGTGGTGAAATTCCACTTGGGATATGGAAGATTCAAGGACTTAAGCATCTACTTGTGTATAACAATAGTCTTTATGGAGAATTACCTTTGGAGATGACACAACTCAAGAAACTGCAAAATATCACATTGTTTAATAACCAATTCTCAGGAATCATACCTCAAAGCTTAGGAATTAATAGCAGTTTAGTAGAGTTGGATTTCACAAATAATAACTTCAGTGGTGAACTTCCACCAAATCTTTGTTTTGGGAAGAAACTAAGCATTTTGATTATGGGCATCAATCAATTTCAAGGTAGGATACCTCATGATGTTGGAAGGTGTACAACTCTTACAAGGCTCATTCTTAAACAAAACAGTTTTACCGGGCCGCTTCCGGATTTTGAAAGGAATATGAATCTGAATTATATGGATATCAGCAACAACAAACTCAATGCTACAATCCCATCAAGTTTAGGGAATTGCACAGTTCTGAATGAATTAGTTTTGTCCAGGAACAGATTTTCGGGGCTTATACCCCAGGAGCTAGGAAATCTTGCGAATCTTCGGACTTTTAATCTTTCTCACAACAACTTAGAAGGTCCTTTGCCTTCTCATTTATCAAACTGCACAAAAATGGACAAGTTTGATGCGGGATTCAATTTCTTAAACGGCTCTTTGCCATCAAGTTTGCGGAGCTGGACAGGGCTAAGCTCATTGGTATTAAAAGAGAATCGATTTAGCGGGGGCATCCCGGTTTTCTTGTCAGAATTTGAAAGGCTTTATGAACTACAACTTGGTGGAAATATGCTTGGAGGAAGAATTCCTAGATCCATTGGAGCATTGCAGAATTTGATTTACGGGTTGAATCTAAGTTCTAATGGGCTGATAGGTGACATTCCTGTAGAGATTCGAAACCTGAAGAGTTTGCTAATGCTGGATCTATCTCAGAACAATTTGACAGGTAGCATAGAAGCTCTTGATGATCTCCATTCATTAGTCGAAATCAATATTTCATACAATTCCTTTCATGGTCCTGTACCAAAGATGCTGATGAAGTTGCTTAATTCTTCCATGACATCATTTATCGGCAATCCTGGCTTATGTATCAATTGTTCACCGTCGGATGGCTCAGTTTGCAACGAAAGCAGCTATCTCAAACAATGCGATAAAAAATCAGCGAATCATAAAGGCCTCGGTAAATTTGAAATTGCAATGATAGTGCTTGGAAGCTCAATATTTGTTGTTTTGGTTTTGCTGGTATTAGTTTATAAGTTTGTTTTCGGAAGAAAATCAAAGCAGGAAGTGAATATCTCTGCCAGAGAAGGTACTTCATCCCTTTTTAACAAAGTCATGGAGGCTACAGTGAACCTAAATGATCGTTATGTTATCGGAAGAGGAGCCCATGGAGTGGTTTATAAAGCCGCAATACGCCCGGACAAAGTTTATGCAGTAAAGAAGCTAGGATTCGCAGCGAGCAAAGGTAAGAATCTGAGCATGGTTAGAGAAATTCAAACCCTCGGAAAAATTAGGCATCGAAATCTGGTGAAATTGGAAGATTTCTGGTTTAAGAAAGATTATGGTCTAATTTTATATAGCTACATGCCAAATGGTAGCCTTCATGATATTTTGCATGAAAAGAATCCACCACTATCCTTAGAGTGGAATGTGAGATATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCATTATGATTGTGATCCTTCCATAGTGCACCGAGACATCAAGCCGAACAATATACTTCTGGACTCTGATATGGAGCCTCATATTGCTGACTTTGGTATTGCCAAACTTTTGGATCACTCTGCTACTTCTTCAAATCCGTCCATGATTGTTCCCGGTACAATCGGCTATATTGCACCAGAGAATGCTTATACAACAGCGAATAGTAGGGAATCGGACGTATACAGTTACGGGGTAGTTTTGCTTGAGCTGATAACAAGAAAGAAGGCGGCGAGTCAGTCATTTACGGAGGAGGGTACTAGTATAGTGGTTTGGGTTAAATCTATGTGGGAGGAAACAAGAGCAGAAATTCATCAAATTGTTGATTCAAGTCTTGCACATGAATTTCTAGATACTCATATAATGGAACAAGCTACCAAAGTTCTTATGGTGGCTTTGCGATGTACCGAAAATGATCCGCGCAATAGACCAACAATGAGAGATGTTACCAAGCAATTATCTTATGCTAATCCAAGGCCAACAAGTATGAAGAGTTAA 3258 0.3828 MRIFVLLKVFLLLLHALVSALNSDGVALLSFMSHWTFIPPSINSTWSSSHSTPCSSWVGIHCNHLHHVVSLNLSGYNIPGQLGPELSSCTFLQSIDLTSNNFSGQIPESFKNLSKLNYLSLSSNYLSGEIPLSFTQIPKLQFFDLSYNSLSGYIPTNIGNMTQLLQLFLQGNNLHGAIPSSIVNCTKLQDLYLNDNQLQGVLPDTLNNLNDLVSFDVSHNSLKGTIPLGSSNTCSQNLQFLDLSFNVFSGGIPSGLGNCSALSQFASVACNLDGTIPSSFGLLTKLTILRLPENHLSGRIPPEIGNCKALTELHLYSNRLEGEIPSELGKLSELQDLELFSNKLSGEIPLGIWKIQGLKHLLVYNNSLYGELPLEMTQLKKLQNITLFNNQFSGIIPQSLGINSSLVELDFTNNNFSGELPPNLCFGKKLSILIMGINQFQGRIPHDVGRCTTLTRLILKQNSFTGPLPDFERNMNLNYMDISNNKLNATIPSSLGNCTVLNELVLSRNRFSGLIPQELGNLANLRTFNLSHNNLEGPLPSHLSNCTKMDKFDAGFNFLNGSLPSSLRSWTGLSSLVLKENRFSGGIPVFLSEFERLYELQLGGNMLGGRIPRSIGALQNLIYGLNLSSNGLIGDIPVEIRNLKSLLMLDLSQNNLTGSIEALDDLHSLVEINISYNSFHGPVPKMLMKLLNSSMTSFIGNPGLCINCSPSDGSVCNESSYLKQCDKKSANHKGLGKFEIAMIVLGSSIFVVLVLLVLVYKFVFGRKSKQEVNISAREGTSSLFNKVMEATVNLNDRYVIGRGAHGVVYKAAIRPDKVYAVKKLGFAASKGKNLSMVREIQTLGKIRHRNLVKLEDFWFKKDYGLILYSYMPNGSLHDILHEKNPPLSLEWNVRYKIAVGIAHGLAYLHYDCDPSIVHRDIKPNNILLDSDMEPHIADFGIAKLLDHSATSSNPSMIVPGTIGYIAPENAYTTANSRESDVYSYGVVLLELITRKKAASQSFTEEGTSIVVWVKSMWEETRAEIHQIVDSSLAHEFLDTHIMEQATKVLMVALRCTENDPRNRPTMRDVTKQLSYANPRPTSMKS* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2016 1085 Gene3D Ribonuclease Inhibitor 270 378 IPR032675 -
Lan6g2016 1085 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Lan6g2016 1085 Pfam Leucine rich repeat 625 678 IPR001611 GO:0005515
Lan6g2016 1085 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Lan6g2016 1085 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Lan6g2016 1085 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Lan6g2016 1085 Gene3D Ribonuclease Inhibitor 20 171 IPR032675 -
Lan6g2016 1085 Gene3D Ribonuclease Inhibitor 172 269 IPR032675 -
Lan6g2016 1085 SUPERFAMILY L domain-like 22 263 - -
Lan6g2016 1085 Gene3D Phosphorylase Kinase; domain 1 764 870 - -
Lan6g2016 1085 Pfam Protein kinase domain 799 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2016 1085 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Lan6g2016 1085 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 86 - -
Lan6g2016 1085 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 84 1071 - -
Lan6g2016 1085 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 84 1071 - -
Lan6g2016 1085 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 86 - -
Lan6g2016 1085 SUPERFAMILY L domain-like 405 710 - -
Lan6g2016 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Lan6g2016 1085 Pfam Leucine rich repeat N-terminal domain 22 63 IPR013210 -
Lan6g2016 1085 SUPERFAMILY L domain-like 282 470 - -
Lan6g2016 1085 SUPERFAMILY Protein kinase-like (PK-like) 784 1073 IPR011009 -
Lan6g2016 1085 ProSiteProfiles Protein kinase domain profile. 794 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2016 1085 SMART LRR_typ_2 522 546 IPR003591 -
Lan6g2016 1085 SMART LRR_typ_2 113 136 IPR003591 -
Lan6g2016 1085 SMART LRR_typ_2 643 665 IPR003591 -
Lan6g2016 1085 SMART LRR_typ_2 161 185 IPR003591 -
Lan6g2016 1085 SMART LRR_typ_2 283 307 IPR003591 -
Lan6g2016 1085 SMART LRR_typ_2 186 208 IPR003591 -
Lan6g2016 1085 SMART LRR_typ_2 331 355 IPR003591 -
Lan6g2016 1085 Gene3D Ribonuclease Inhibitor 381 712 IPR032675 -
Lan6g2016 1085 Gene3D Transferase(Phosphotransferase) domain 1 871 1083 - -
Lan6g2016 1085 SMART serkin_6 794 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2016 Lan-Chr6 30930941 30934574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2016 18 1073 Receptor kinase-like Gene Family AT1G73080 51.190 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g2016 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2016 - - gmx:100778035 1494.95