Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2005 ATGAGTTGCCAAAAGGGTCTTTGTGGAGAGAAGGGTTCCTCTGATTATATGAGTGGCAAGGTGGTGGTGGTTGCATTCAAAGCTTGTAGAGAAATTTCAAAGACTGCTTTGGTTTGGGCTTTGACTCATGTTGCTCAAAATGGAGATTGCATTAAGCTATTGGTTCTCATTCCTGCTATATGCTCATGCAAGAGGATATGGGGCCTTTCGAGATTCGCTACTGATTGTACCACTGGTCATTGGATATCCGGTGTAGGAACTGCTTCGGATCAGAAAGAACTTGTTGCAAATTCATGTTCTCAAATGGTGCTTCAACTTCATGATTTTTATGATCCAGAGAAGATAAAGATCAGAGTAAAGATTCTTTCAGGTTCTTCATGTGGAGCAGTGGCTGCTGAGGCTAAGAAAGTCCAATCAAGCTGGGTTATACTAGACAAAAAATTGAAACATGAAAAGAAATATTGTATGGAAGAGCTGCGTTGCAATATCGTAATTATGGAGCGATCTCGGCCTAAGGTGCTAAGACTAAATTTGATAAGTTCAACAAATACGGAAATTAAATTGGGTTGCCCGTTGCCATCAAAGCTGAATGCATATTCAAGAAACTTGAAGGAAAAGTCTGAACATCAAGATATGATTAGAGGCCGAGTTGTTACTGCTGTTAGTAGTCCTGAACAAGGGTCAACCTTGACTGCTACTGAAATTGGAACATCATCAGTATGGAGCTCCGAAATCGGTGCTTCTCCATTTTCTCACTATGATAATTATGAAAGAAGAATGAGAGGTTTTCCCTTTATTCATGAGGAAAGTGAATCTGATTCAGAGTGTGAGGGTATGAGTTTTTCATCCAAAAGTTCATATTTCCAGCCATGGGTTACAAATGCAATTTCGAAACAAGAAGACAGTGTTATGCTTAAGTCCAGTGATAAGGCTTTGGTTTCTACCTATGAAACATTGCTTAAAAGATTATCAAAGTTGGATCAAGATCCTGATTTATTAGGCCTTAAACTTAATTCCAAACTTGATGTAAACTTAAGCAGAAGTGTTAGAGAGGCAATTTCACTAACCCGAAATGCCCCTCTTGGTCCTCCTCCATTGTGCACTATATGTCAGCACAAGGCACCTATATTTGGGAACCCTCCAAGATGGTTTACATTTTCTGAGTTGCAACTTGCCACTAGTGGATTTTCGCATGCAAATTTCTTGGCTGGAGGTGGGTTTGGTTCCGTACATCGTGGTGTTCTACCTGATGGGCAGATCATTGCTGTGAAGCAGTATAAATTATCTAGTACTCAAGGTGATATAGAATTTTGCTCAGAAGTGGAGATCTTAAGTTGTGCACAACACCGTAATGTTGTGATGCTAATTGGATTTTGTGTGGAGGATGGAAGAAGACTGCTAGTTTATGAATATATCTGCAATGGATCTTTATATTCTCTTCTTCATGGACAGAAGAAGAATGCGTTGGAATGGTCTGCACGTCAAAAAATAGCAGTGGGAGCAGCTCGTGGTCTGAGATACCTTCATGAAGAGTGTAGAGTGGGTTGCATTGTGCACCGTGATATGCGGCCTAACAACATTCTCCTCACTCATGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGATGGCAGCCGAATGGAGTAGAAACCAGAGTGATAGGAACATTCGGGTCTTTGGCACCAGAATATACTCAAAGTGGTGAAATCACGGAGAAAGCAGATGTGTATTCCTTTGGCATAGTATTACTAGAGCTTATCACCGGAAGGAACACTATGGATATAAACAGGCCTAAAGGCCAGCAATGCCTCCATGAATGGGCACGACCATTGCTTAAAGGGCATGCCATACATGAATTGGTTGATCCTGTTATAAGAAACTGCTACGATGATCACGAGGTTCATCGTATGCTGCAATGTTCATCGCTGTGCATCCATAAGGATCCTCGTCTAAGGCCTCGAATGTCTCAGGCGCTTCGGATTCTGGAAGGTGACATTCTCTTGTGA 2010 0.4134 MSCQKGLCGEKGSSDYMSGKVVVVAFKACREISKTALVWALTHVAQNGDCIKLLVLIPAICSCKRIWGLSRFATDCTTGHWISGVGTASDQKELVANSCSQMVLQLHDFYDPEKIKIRVKILSGSSCGAVAAEAKKVQSSWVILDKKLKHEKKYCMEELRCNIVIMERSRPKVLRLNLISSTNTEIKLGCPLPSKLNAYSRNLKEKSEHQDMIRGRVVTAVSSPEQGSTLTATEIGTSSVWSSEIGASPFSHYDNYERRMRGFPFIHEESESDSECEGMSFSSKSSYFQPWVTNAISKQEDSVMLKSSDKALVSTYETLLKRLSKLDQDPDLLGLKLNSKLDVNLSRSVREAISLTRNAPLGPPPLCTICQHKAPIFGNPPRWFTFSELQLATSGFSHANFLAGGGFGSVHRGVLPDGQIIAVKQYKLSSTQGDIEFCSEVEILSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLYSLLHGQKKNALEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPNGVETRVIGTFGSLAPEYTQSGEITEKADVYSFGIVLLELITGRNTMDINRPKGQQCLHEWARPLLKGHAIHELVDPVIRNCYDDHEVHRMLQCSSLCIHKDPRLRPRMSQALRILEGDILL* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2005 669 ProSitePatterns Tyrosine protein kinases specific active-site signature. 517 529 IPR008266 GO:0004672|GO:0006468
Lan6g2005 669 Gene3D Phosphorylase Kinase; domain 1 368 471 - -
Lan6g2005 669 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 669 - -
Lan6g2005 669 Gene3D Transferase(Phosphotransferase) domain 1 472 667 - -
Lan6g2005 669 Pfam Protein kinase domain 404 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2005 669 PANTHER OS01G0253100 PROTEIN 17 669 IPR045271 GO:0004714|GO:0006468
Lan6g2005 669 CDD STKc_IRAK 402 665 - -
Lan6g2005 669 SUPERFAMILY Protein kinase-like (PK-like) 380 661 IPR011009 -
Lan6g2005 669 ProSiteProfiles Protein kinase domain profile. 396 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2005 Lan-Chr6 30854387 30858826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2005 346 658 Trihelix Transcription Factor Family AT1G68690 47.352 7.83e-91 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lan6g2005 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2005 - - aprc:113855006 1033.48