Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2004 ATGACAGAACATAGATTGAAGAGAGAACAATTCAACCGCACTAAACATGATTCTAACTTTTCTCCATGGAAGATTCTGATTGGACCAAGTGATTGGGAAGAATATTGTGAAGGAAAAGAAGGATGTAGAAGATACATGATTCATAATCTGCCTCAGAATTCAGGTGCAGGAGTATATGAGCTTGGTATAGGTGTGTGGAGTAGTGGATTGAGACGTCAAAATTACAAATTTGCCCCTGATCAAAATCATAGTATAGTTGTAGTGTATATTGGACAAGCTGATAATGTGAGAGGAAGATTACAACGTTATGGTAGAAATGGAGCACATTTGGTGAATGGTGATGGTACTCCATTCTTTAATCACATTTTTTCACTTGGCTACCCTATCCTTTATAGATGGGCTCCTATGGAAAAGAAGGAAGATGCCATCCGAACAGAAGATCAGCTGCTCTGTACATTTGATTATGCTTGGAACACAAGCAATAATGGTACTCGGCGACCTGATGATATTCTTCAAAAGCTCAACAAAATTGCTTCTGGCACTAGAACATTTTCAGATTTGGCCAAAGTGCTTCTACCTTTCACTGAGAGAAAAGTTGGTATCAGAATTAAATCAAGCAAGTTGCCTCTTACAGATGACAACAAATCAGATGAAGACAATGGCGGCTATAATTTCCTATCTCGAGTCTTCAAATTTAGCAGATCGCGTCCAAGGATAGTTCAGGATACCAGTGAAGGCATTCAGAAGAATGATCATAAAATTTGTGGAGTGGCCTTGGGTGATGGTTCTGTTTGTACAAGGCCACCAGCTGAAACAAGAAAGAGGTGTCCTGAGCACAAAGGAATGAGAACAAAGACATCCAATGCCAAAACAATCAGGGCACCGAAGTGGGAAAGCGCTGTGGTACTAGAACCTAATGAGATTTGTCAAACAAAGGTTAATCACTACAGAGACCAACATGTTGGCCATGATATTCAAGACCCGGCACAAAAAGTGGTTGAGAATCCTGCTGATGAGAGTATAAGTAACACAAATATATGTGGAATCATCTTAGATGATGGCTCCACTTGTAGCAGACAACCAGTTAAAGGGAGAAAAAGATGCCTTGAGCATAAAGGAATGAGAATAAACACATCCAGTGCCAAAACAATACCCAAATCGGAAAGTACTGTGGTACTAGGACCTAATGAGTTTTGTCAAACAAAGGGAAATCGCTACAGAGAACATGTTGGCCATGATGTTCAAGACCCTCCACAAAAAGTGATGGAGATTCCTGCTGATGAGAGTATAAGTAACACACATATATGTGGAATCATCTTGGATGATGGCTCCATTTGTAGCAGACAACCAGTTAAAGGAAGAAAAAGGTGCCTTGAACATAAAGGGAAGAGAAATCGTGCATCCGTTCATAGAAATCATCAATGTTAA 1428 0.3992 MTEHRLKREQFNRTKHDSNFSPWKILIGPSDWEEYCEGKEGCRRYMIHNLPQNSGAGVYELGIGVWSSGLRRQNYKFAPDQNHSIVVVYIGQADNVRGRLQRYGRNGAHLVNGDGTPFFNHIFSLGYPILYRWAPMEKKEDAIRTEDQLLCTFDYAWNTSNNGTRRPDDILQKLNKIASGTRTFSDLAKVLLPFTERKVGIRIKSSKLPLTDDNKSDEDNGGYNFLSRVFKFSRSRPRIVQDTSEGIQKNDHKICGVALGDGSVCTRPPAETRKRCPEHKGMRTKTSNAKTIRAPKWESAVVLEPNEICQTKVNHYRDQHVGHDIQDPAQKVVENPADESISNTNICGIILDDGSTCSRQPVKGRKRCLEHKGMRINTSSAKTIPKSESTVVLGPNEFCQTKGNRYREHVGHDVQDPPQKVMEIPADESISNTHICGIILDDGSICSRQPVKGRKRCLEHKGKRNRASVHRNHQC* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2004 475 Pfam GIY-YIG domain-containing protein 20 171 - -
Lan6g2004 475 MobiDBLite consensus disorder prediction 269 289 - -
Lan6g2004 475 CDD GIY-YIG_SF 87 118 - -
Lan6g2004 475 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 3 389 IPR038909 GO:0003677|GO:0006355
Lan6g2004 475 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 330 390 IPR038909 GO:0003677|GO:0006355
Lan6g2004 475 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 418 469 IPR038909 GO:0003677|GO:0006355
Lan6g2004 475 MobiDBLite consensus disorder prediction 271 285 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2004 346 474 HRT Transcription Factor Family AT5G56780 37.405 5.02e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Lan6g2004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2004 - - lang:109350609 994.956