Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1991 ATGAATAAGATGAACAACAACATGAGTTCTGTGAGTAGCTCTGATCTGATAGATGCAAAGCTTGAAGAGCACCAACTTTGTGGATCCAAGCAGTGCCCTGGTTGTGGACACAAATTTGAATCAAAACCGGATTGGGTAGGCCTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAAGAACTAATAGAACACCTTGAAGCAAAAGTGGAGTCCAAGAATATGAAATCACACCCTTTGATAGATGAATTCATTCCTACTATTGAAGGAGAAGATGGTATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTAAGCAGACACTTTTTCCACAGACCCTCAAAGGCTTATACAACTGGAACAAGAAAGAGAAGAAAGATACAAAATGAGTGTGACTTGCAAGGTGGAGAAACAAGGTGGCACAAGACAGGTAAGACTAGGCCAGTAATGGTGAATGGAAAACAGAAAGGGTGTAAGAAAATTCTAGTCCTCTACACCAATTTTGGTAAAAACAGAAAACCTGAGAAGACAAGTTGGGTTATGCATCAATACCATTTAGGCCAGAATGAAGAAGAGAAAGAAGGGGAGCTTGTGGTGTCAAAGATATTCTACCAAACACAACCAAGACAGTGTAATTGGGGTGATAGAAGTGCAGCAACAACTGGTGAAGGAAGTGGTGAAGTACCTAATAATAATAATAATAGTGGTAGAAAGGATAGTGGAAGTGGAAGTTGTTCTTCTTCAAAGGAAATAGTGACTCATAGAGATGAAATGTCTGTTGTTGTTGGTGTCCCTCCTCCAATAACAAGTTTCACTCATCCCTTGGATATTCAACAACATCTTAAATCTGATCATCATTTCACCTTCATGCCTTTCAGAAAAAGCTTTGATCATGAGGTTGGAATAGGAGAAGCATCTACAGCAAGAGAAATCCAAGCATCAGGCTCATGTGAAGAAGTACATGAACATCATAGACCCCAACTTATAGCTCATCATCATCAGCAACATCAACATCAACAGCAACAACAGCAACAACAGCAACAACATCAACAGCAACATGTGCAGCATCAAATTACAACATCAGCTTTTCATATGAATAGGCCTTCACATCCAATATCTACACTTATCTCTCCGCCTCCCCTTCACCACACATCCATCATTCTCGACGATAATCCTTACCATGCTTCTAGAATTATGCTCCAACAAAATCAACATTTTCAGCAACAACATCATAATCTAGGAACAAGGTCTGCGTCTGGTTTAGAGGAATTCATTATGGAGGGCACTTCAACTGATATCAAAGAGGAATCATCCATCACAAACCCACAAGAGGCTGAATGGTTGAAGTACTCTTCTTACTGGCCAGACCCTGGCAACCTAGACGATCATCATCATCATCATCATGGATAG 1422 0.4044 MNKMNNNMSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFESKPDWVGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTSWVMHQYHLGQNEEEKEGELVVSKIFYQTQPRQCNWGDRSAATTGEGSGEVPNNNNNSGRKDSGSGSCSSSKEIVTHRDEMSVVVGVPPPITSFTHPLDIQQHLKSDHHFTFMPFRKSFDHEVGIGEASTAREIQASGSCEEVHEHHRPQLIAHHHQQHQHQQQQQQQQQQHQQQHVQHQITTSAFHMNRPSHPISTLISPPPLHHTSIILDDNPYHASRIMLQQNQHFQQQHHNLGTRSASGLEEFIMEGTSTDIKEESSITNPQEAEWLKYSSYWPDPGNLDDHHHHHHG* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1991 473 Pfam No apical meristem (NAM) protein 49 190 IPR003441 GO:0003677|GO:0006355
Lan6g1991 473 ProSiteProfiles NAC domain profile. 48 209 IPR003441 GO:0003677|GO:0006355
Lan6g1991 473 SUPERFAMILY NAC domain 43 209 IPR036093 GO:0003677|GO:0006355
Lan6g1991 473 MobiDBLite consensus disorder prediction 217 256 - -
Lan6g1991 473 MobiDBLite consensus disorder prediction 334 361 - -
Lan6g1991 473 Gene3D NAC domain 57 213 IPR036093 GO:0003677|GO:0006355
Lan6g1991 473 MobiDBLite consensus disorder prediction 337 361 - -
Lan6g1991 473 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 449 IPR044799 GO:0003700
Lan6g1991 473 MobiDBLite consensus disorder prediction 217 253 - -
Lan6g1991 473 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1991 Lan-Chr6 30766422 30772589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1991 12 458 NAC Transcription Factor Family AT5G56620 51.282 5.97e-134 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g1991 NAM 4.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1991 - - gmx:100795246 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0359 18 6656692 6664599 Lan6g1991 6 30766422 30772589 LSH
Lan18g0359 18 6656692 6664599 Lan6g1991 6 30766422 30772589 PCT
Lan6g1991 6 30766422 30772589 Lan6g1991 6 30766422 30772589 PCT