Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1984 ATGGATCCAAATTTTGTTGGAAATTGTGGTGCTGATTTCTACAATTCAGATCCAAATTATTGGGATCTTAATGGACAGTACCAGAACCTTTTCAATTTCACAAATTCTGATCCTTTTTATCAATTTGATGCTGATGCTAATGACCCACTTAGTTTTTCTACACGTGATACTTCATTCTTCAACTCTTCTGTAGTTGAAGCTCAAGTTGTATCATCAGAGCCGTACAATCTATCATCCCTTGAAGATTCTGAGTTTTCAGAAACTGCTAGGTACATAAGCCAGATTCTCATGGAAGAGAACTTTGAACAAAAGCCATGCATGTATTATGACCCATTGAGTCTGCAAATTACTGAGAAATCGTTCTCCGATGCCCTGATAGAAAAATTGCCTCATTCGCCTGATCAACACCCGCTTGACATTCATCAGAATCTGGAAAGTCCAGATGGGAATTGTTCTGGAAGCACTAGTTCTGCTGATTCTGGCAGCAGTGGCACCGATAATCGCCACGAGTTGAAGCCTCTTCCACCAGATACCCCTGTTTCTGGTGATTATACTTTCCAGTTAAATTCAGATTCCACCTCCCATTTACACTCTCAACTTCCTCAGCATGCTTTGACTAGTATTAGTAATGGAATGTTGGATTTGGATTCTTCTGTCACCAAGCTCTTGGCTCAAAATATCTTTAGTGATGCAGACTCTATGTTGCAGTTTAGAAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAGGAACCCAGCTTTTCACTGGTGTAGCAAGCAGCAGCGTGTCTCTAAAGCCAAAGGACGAAGTAGAGAAGGTGGCGGTCAAGACAGAGAATGGTGTTAGGGAGAACTCGTATGCGTTGAAGAGTAGGAAGAATCATGAGCGTGAAGGTGATGGTGTTGAAGAAGAAGGAAGAAGCAACAAGCAATCTGCAGTAAGTAGTGTTGAGGAGAGTGGAATATCTGAAATGTTCGACCGAGTGTTGCTTAGTATTGAAAATGTGCCGCTGCATGCTGAACAACAGGATGTATCGGTTATAGACAGTAACGAACAACCAAGTGAACAACCACCTTCATCTAATAGAGGGAAGTCTAGATTGAAGAAACAAGGAAGGAAGAAGGAAACTGTGGATTTGAGGACTCTTTTGATTCTATGTGCACAAGCTGTATCTGCCGGTGACAACAGGACTGCTAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCTCCCTTAGGTGATGCATCACAGAGGTTGGCTCATTACTTTGGCAATGGTTTGGAGGCACGTTTGGTTGGAGCTGGAACTGGAACCCAAATATTTATTAACTCTCCAAGCTACAAGAAGTTTACTGCTGCTGATTTTCTAAAAGCTTACCAAGTTTATATATCTGCTTGCCCTTTCAAGAAATTGGCGCATTTCTTTGCAAACAAAACGATTTTGAAAGCAGCTGAAAATGCAGAAACCCTTCATATTATCGATTTTGGTATCCTGTATGGCTTCCAGTGGCCAATACTTATCAAGTTTCTGTCAAAAAGAAGTGGCGGGCCTCCCAAGCTACGCATCACAGGGATAGAGTATCCCCAACCTGGCTTTCGTCCATCAGAAAGAATTGAGGAGACAGGACATTGTCTAGCTAACTACTGTAAGCGTTTCAATGTTCCCTTTGAGTTCAAAGCGATAGCATCACGAAACTGGGAAACCATTCTAATTGATGACCTTAAAATCAAGAGCAATGAGGTACTTGCTGTGAACTGTCTGATAAGGTTTAGGAATTTACTCGATGAGACAATTGAAGTGAATAGTCCTAGAAATGCAGTTTTGAATTTAATCAGGAAGATAAATCCAGATGTTTTTGTTCAATCCATAGTAAATGGATCATACAATGCCCCTTTCTTTGCCACACGCTTCAGGGAGGCACTGTTCCATTTTTCTGCAATTTATGATATGTATGATACTCTCATACCCCGTAGCAATGAATGGAGGTTGATGATTGAGAGAGAGATTTCAGGTAGGGAGATTATGAATGTTGTAGCATGTGAAGGTTTCGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCTAGGAATACAAGGGCTGGTTTTAAGCAGATCCCTCTGGATAAGGAACTAATGACGGGGTTTAGGAGGAAAATAAGGGAATGGTACCAGCACGACAGAGATTTTGTGTTTGACGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCGTCTTGTATGCTTCCGCTGCTTGGGTGCCTGCATAA 2280 0.4189 MDPNFVGNCGADFYNSDPNYWDLNGQYQNLFNFTNSDPFYQFDADANDPLSFSTRDTSFFNSSVVEAQVVSSEPYNLSSLEDSEFSETARYISQILMEENFEQKPCMYYDPLSLQITEKSFSDALIEKLPHSPDQHPLDIHQNLESPDGNCSGSTSSADSGSSGTDNRHELKPLPPDTPVSGDYTFQLNSDSTSHLHSQLPQHALTSISNGMLDLDSSVTKLLAQNIFSDADSMLQFRRGLEEASKFLPQGTQLFTGVASSSVSLKPKDEVEKVAVKTENGVRENSYALKSRKNHEREGDGVEEEGRSNKQSAVSSVEESGISEMFDRVLLSIENVPLHAEQQDVSVIDSNEQPSEQPPSSNRGKSRLKKQGRKKETVDLRTLLILCAQAVSAGDNRTANELLKQIRQHSSPLGDASQRLAHYFGNGLEARLVGAGTGTQIFINSPSYKKFTAADFLKAYQVYISACPFKKLAHFFANKTILKAAENAETLHIIDFGILYGFQWPILIKFLSKRSGGPPKLRITGIEYPQPGFRPSERIEETGHCLANYCKRFNVPFEFKAIASRNWETILIDDLKIKSNEVLAVNCLIRFRNLLDETIEVNSPRNAVLNLIRKINPDVFVQSIVNGSYNAPFFATRFREALFHFSAIYDMYDTLIPRSNEWRLMIEREISGREIMNVVACEGFERVERPETYKQWQARNTRAGFKQIPLDKELMTGFRRKIREWYQHDRDFVFDEDNNWMLQGWKGRVLYASAAWVPA* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1984 759 MobiDBLite consensus disorder prediction 145 164 - -
Lan6g1984 759 MobiDBLite consensus disorder prediction 347 374 - -
Lan6g1984 759 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 758 IPR005202 -
Lan6g1984 759 Pfam GRAS domain family 380 756 IPR005202 -
Lan6g1984 759 ProSiteProfiles GRAS family profile. 371 757 IPR005202 -
Lan6g1984 759 MobiDBLite consensus disorder prediction 182 197 - -
Lan6g1984 759 MobiDBLite consensus disorder prediction 130 197 - -
Lan6g1984 759 MobiDBLite consensus disorder prediction 285 319 - -
Lan6g1984 759 PANTHER SCARECROW-LIKE PROTEIN 34 55 758 - -
Lan6g1984 759 MobiDBLite consensus disorder prediction 286 307 - -
Lan6g1984 759 MobiDBLite consensus disorder prediction 347 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1984 Lan-Chr6 30718938 30722191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1984 90 759 GRAS Transcription Factor Family AT1G07530 52.074 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan6g1984 GRAS 6.5e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1984 - - adu:107461599 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1984 6 30718938 30722191 Lan10g0089 10 527420 529616 LSH
Lan6g1984 6 30718938 30722191 Lan13g0319 13 2098090 2100837 PCT