Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1977 ATGGTAAAGCAGCACTTGATTTCTTCTAAGAAGAACATTGTTGAAATTGAAGGCAATAGTAATAATAATAATCAAGGATGCATGTGGGGTATACTTCATATTCTTGATTATCATCATTGGCATGTTAAAAGGGTGTTACCTCATAAAAGACATGACAGATCAGATAAGAAAAAAACCATTTTGCATAACCAAGGCGAAAAAGATCAACTAAATCGAAATGCAGAAGCAGAACCCTTCATTGTAGGCCAACATGGGAAAAAAATGAGTGCTACAGGCAAGAGTTCCTCCGAAAATCGGAAGAAGGGACGATACACCAAAGAATCTTTACATTTAGAGTACTCAGGGGAAAACCAGGCCAATAGTGAGAATACACTTAATTTGGAGAAAGATGGCAAGTCAGAAGAAGCTTCCCTTGATCAAACATATTTGGAAACAAACATTGTTAAGAGAGACATTTCGGATAAACTTGAGAAGCATAATGATATTTTGAAGATATGTGGTGTGGAGAAGGATTTACTTCTCAAGTTTCTGCATGATTTAGATGTTAGTAGGAAAAAACTCCAAGCTTCCAGCAATAAATCAAGATTGACAAAATCAGGGTCATTTCCTTTAACCGAATCTTCGAAGATGAGAAGCGTAAGCACTCGTACCTTCAAACACAAGCAAACTGAAATTTGGGCATTTCCTAAGGGAGAAAAGTTGCTTGTTGGTACTCAAGCACCAAAAATTTCTGCATCTACTTTGGTGAAAGATGTTTCTAATGAGAGTTCCATGGAACAAAAACCCAGCACTTATTCAAGGTCTTCACAAGGATTAAATCACAAAGGGTGGAATCAATTGGTTCTTCATAGCTTCAAAGTTATAAAGCAGAAGATAAAACATGCTCTTGTCGAGGCAATTCACCGTAGATATTCACTAAAATATAGCATTACCAATGATGAGAAAGTTGTCTCACAAATCTTAGATGATGGCGTGATTCAAGAGTGCGAAAAGAATGATAGCTCGAATGAGACTAAAGCTTATGATTATGATTCCAACAAACATGAAGTTCGCCTAATGCGAAGAACGTCGTCTCTGAATGAATCTCTTGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCAATGATGTCAAGTGGCATAGCTCAAAGTCTAAAAGCTTAAGATTAACAAATGAAGATAAGGTTCTCAAAAGTGGAAATCCTCCTAAGTTTTCCAGAAGCAATTTCTCTCTGCCTAGTCTCGAGTCTTTACGCTTCATTCTACACGAGGTACTTCTCGACACGAATATAGGGGACACAGTGGAAACTGATAATCATGTCCAAAGAAAGTCGGTGAGCTTTTCTTCACAGACTGACAAACCACTCAATCAGATCGAAGAGAATGAAATCGCGGAAACAGTAGAAGGAGATGGCAAGGATGTGAATTCTAGTCCTTTATCAGGTAAGATTGTCGAGGAAATTGACAGAGTTACCCGTGATCGAATGGAGGACAAACATGAGATAGCAGCAGAAGATGGAAATTTTCGCCATGAAAAAGTTGAAATAAGCATAACTATATATCCTAACAAGGAGGTAGTAGCATGTCTTGAAACTTGCAGTGAAAACAATACAATCAAACAAGCAAAAGGTGGAGAGTTGAATGATCGAAGCTCTATCGTCGAAGAATCGGAGTCTGATTTAGCAAAAAGAAGAAGTGTAGATTCCTTTGAAGGCTCTTCATCCAAAAATGCTAGTGTAACAGCAAAAGACACAAACACTAGTTCTGACAAAAACTTCCTGCTACATAAATCAGTTACAAACAACAATTCCGATTTCATGTATGTGAAAAAGATTCTTGAAGTTTCCGGCTTCATGGAAAATGAGCAGAATCAAATATGGCACACATTAGACCAGCCTCTAAAGCCTTCATTACTCAAGGATTTGTATAATGAAATCGATTTCTCTGGAGAAGAGATTGTTAGTCCCTATGATCACCAACTTCTATTTAACTTAGTTAATGAAGTTCTCATTCAAATAGACGAAATGTCACCAACTTACTTCCCTAGACCTTTCTCCTTCAACTACCGCCTTCGTCCAACGCCGAAGGAGTACTATCTTCTTAATGAAGTATGGACTAGTGTTAACTCATTCCTGAGCTTAAGACCAGAGCTAGATCAGACATTAGACGATGTCGTAAGTCGCGATTTGGCGAAAGGAAGTGGCTGGATGAATCTCCAACAGGAAGAGGAGTATGTAGCACTTGAACTAGAAGAGATGATTGTTGATGATTTATTAGATGAACTTGTCTTCTCATGA 2298 0.3786 MVKQHLISSKKNIVEIEGNSNNNNQGCMWGILHILDYHHWHVKRVLPHKRHDRSDKKKTILHNQGEKDQLNRNAEAEPFIVGQHGKKMSATGKSSSENRKKGRYTKESLHLEYSGENQANSENTLNLEKDGKSEEASLDQTYLETNIVKRDISDKLEKHNDILKICGVEKDLLLKFLHDLDVSRKKLQASSNKSRLTKSGSFPLTESSKMRSVSTRTFKHKQTEIWAFPKGEKLLVGTQAPKISASTLVKDVSNESSMEQKPSTYSRSSQGLNHKGWNQLVLHSFKVIKQKIKHALVEAIHRRYSLKYSITNDEKVVSQILDDGVIQECEKNDSSNETKAYDYDSNKHEVRLMRRTSSLNESLDRYTQLFEKSFSNDVKWHSSKSKSLRLTNEDKVLKSGNPPKFSRSNFSLPSLESLRFILHEVLLDTNIGDTVETDNHVQRKSVSFSSQTDKPLNQIEENEIAETVEGDGKDVNSSPLSGKIVEEIDRVTRDRMEDKHEIAAEDGNFRHEKVEISITIYPNKEVVACLETCSENNTIKQAKGGELNDRSSIVEESESDLAKRRSVDSFEGSSSKNASVTAKDTNTSSDKNFLLHKSVTNNNSDFMYVKKILEVSGFMENEQNQIWHTLDQPLKPSLLKDLYNEIDFSGEEIVSPYDHQLLFNLVNEVLIQIDEMSPTYFPRPFSFNYRLRPTPKEYYLLNEVWTSVNSFLSLRPELDQTLDDVVSRDLAKGSGWMNLQQEEEYVALELEEMIVDDLLDELVFS* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1977 765 PANTHER PROTEIN TRM32 19 765 IPR044257 -
Lan6g1977 765 MobiDBLite consensus disorder prediction 549 570 - -
Lan6g1977 765 MobiDBLite consensus disorder prediction 571 587 - -
Lan6g1977 765 Pfam Domain of unknown function (DUF4378) 605 761 IPR025486 -
Lan6g1977 765 MobiDBLite consensus disorder prediction 80 136 - -
Lan6g1977 765 MobiDBLite consensus disorder prediction 93 110 - -
Lan6g1977 765 MobiDBLite consensus disorder prediction 111 126 - -
Lan6g1977 765 PANTHER PROTEIN TRM32 19 765 - -
Lan6g1977 765 MobiDBLite consensus disorder prediction 545 587 - -
Lan6g1977 765 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1977 Lan-Chr6 30671595 30675305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1977 161 754 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.796 6.89e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1977 - - lang:109351072 1502.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1977 6 30671595 30675305 Lan3g0055 3 371849 374741 LSH