Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1957 ATGTTGATTTTTAACCTGAATGCTGATTCAAATGAGAACGGTGATTTACTCGAGTTGTTGGAAAAGATTCCAGAAGCTTCTTCGGGGACTTCGAATTCCTCAATAGTGAATGCTGATGGTTCTAGTAACATAGGAGGCGGCGATGACTCGTGCTCCACACGCGCCGGTAACGGTAGTGGCGTGTTCACGTTTGATTTCGGTATCATGAAGGTGGAAGGAAGGAATGATGTTGTGACGCCGACGAAGGAGTTGTTTCCGATGAGTTCCGGGAATTGGAAGATGCAGCAACAGTCAACGTTGCCGTTTCCGGCGAAGAAGAGTGGCGTGGATCTCTCGTGGGAACAAGGCGAAAATAGCGAGATGGTGAAGATGGTTCAGGCTCAGAAACCGGTGAAGAAGAGTAGGAGAGGACCAAGGTCTCGGAGTTCACAGTATAGAGGAGTCACTTTCTACAGAAGGACCGGTCGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGCTTTGATACCGCTCATGCTGCTGCTAGGGCTTATGATCGAGCTGCTATCAAGTTCAGGGGAGTTGATGCTGACATCAATTTCAATCTCATTGATTATGATGATGATCTTAAACCGTTGAAGAATCTCTCCAAAGAGGAATTTGTGCAAACACTACGTCGCCAAAGTACTGGTTTCTCAAGGGGGAGCTCAAAATACAGAGGAGTGACACTTCAGAACTGTGGCCGTTCGGAAGCTCCAATGGGACAATTCCTTGGCAAAAAGGCTTATGAAAAGGCAGCTACCAATTGCAATGGAAGGGAAGCGGTGACCAACTTTGAGCCAAGTAAATATGAAAGCAACATGAAACCCAAAGCCATTAATGAAGGTGACAGTCACAATCTAGACCTCAATCTGGGCATAGCAACCCCAGGACATGGACCCAAAGAAAACAAGGAGAATCTTCAGTTCCAGCCTGTTCCTTACAACATGCATCTTGGAAGAAATTCAAGGGTGGAGACTAATGTTCATTCAGTTATTGATGGTCCAGCTTTGAAAAGCCTGGTTGTAACTGAAGATCGTCCTTCTGTCTGGAATGCCACATATTCTAGTTTCTTTCCCACTCAGGAAATAGGAGAGAGAATCGTCCCTCATCCTTATCAAGGACTCCCCAACTGGGCGTGGCAAACGCAGGGTCAAGTCACTGCTACCCAAATGCCACAGTTCTCTACAGCAGCAGCAGCATCATCAGGATTCTCAATTTCAGCTACATCTCCACCAAAATCTATGAACCCATTTCCCCAGAGTCTTTGTTTTACTTCACCCAGCACACCTGTTAGCATTGCACCTCAATACTATTACCAGGTGAAGTCCCCGCAGGCACCACAATAG 1383 0.4657 MLIFNLNADSNENGDLLELLEKIPEASSGTSNSSIVNADGSSNIGGGDDSCSTRAGNGSGVFTFDFGIMKVEGRNDVVTPTKELFPMSSGNWKMQQQSTLPFPAKKSGVDLSWEQGENSEMVKMVQAQKPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLIDYDDDLKPLKNLSKEEFVQTLRRQSTGFSRGSSKYRGVTLQNCGRSEAPMGQFLGKKAYEKAATNCNGREAVTNFEPSKYESNMKPKAINEGDSHNLDLNLGIATPGHGPKENKENLQFQPVPYNMHLGRNSRVETNVHSVIDGPALKSLVVTEDRPSVWNATYSSFFPTQEIGERIVPHPYQGLPNWAWQTQGQVTATQMPQFSTAAAASSGFSISATSPPKSMNPFPQSLCFTSPSTPVSIAPQYYYQVKSPQAPQ* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1957 460 MobiDBLite consensus disorder prediction 27 51 - -
Lan6g1957 460 SMART rav1_2 144 206 IPR001471 GO:0003700|GO:0006355
Lan6g1957 460 SMART rav1_2 236 284 IPR001471 GO:0003700|GO:0006355
Lan6g1957 460 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 427 - -
Lan6g1957 460 Pfam AP2 domain 144 192 IPR001471 GO:0003700|GO:0006355
Lan6g1957 460 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 427 - -
Lan6g1957 460 Gene3D AP2/ERF domain 143 201 IPR036955 GO:0003700|GO:0006355
Lan6g1957 460 SUPERFAMILY DNA-binding domain 143 200 IPR016177 GO:0003677
Lan6g1957 460 CDD AP2 144 199 IPR001471 GO:0003700|GO:0006355
Lan6g1957 460 ProSiteProfiles AP2/ERF domain profile. 144 200 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1957 Lan-Chr6 30502904 30506803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1957 1 426 AP2-EREBP Transcription Factor Family AT5G60120 44.924 6.78e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan6g1957 AP2 6.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1957 K09284 - gmx:100777102 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1957 6 30502904 30506803 Lan10g0117 10 707245 711733 LSH
Lan6g1957 6 30502904 30506803 Lan8g1695 8 23821281 23825344 PCT
Lan8g1695 8 23821281 23825344 Lan6g1957 6 30502904 30506803 PCT