Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1931 ATGAAGCCTCAATTCAAAGTTGCTGTTGCTCTTGTTATTAGCTTGGTTTCGATTCATCCCTCATTTTGCGGTGAACCTTCTGATCATGGCCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCCTAGGAAATCAGGGACACTCTCTTCCAAATTGTTCCGAGTCGTGCGATTGTCATTCAGATGCCAAAGAGAGTTCATCCAAATGGACATGCATATGTGATCCAAATGGGTTTCCTAAAGTGGCAGCGGATGGTCATCGTAATAATTGTTTCAAATCCTGCAACTGCACCTGGGGAACTATCAGAATGCCACTAGGTTCAAAGAAACACATTTCGAGCAAGATTGTCGTAGCCATTCTATCGATATGTGTTGTATGCACAACTATTGCAATTGTTGCCTCTGCTGCATGCTATGTCAACCGAAAGGAAAGAAGTACTATTCATTCACCAATGATCTTATCAGATAAGGAAACGAGTTACAATAGTTCCTCCAACTTATTTAGTCACCGGATTTCTTCAGTTCCAGAAACAAAAGTCACTATAAATTCTCCCATTAGTCATATTACAGGATGCTTTCAGAAGATCTGTTTCTTGTTTGGGAGCCAAAAAGAAACTTTCCATGGAAACATTATTCAATTTTCATTTGCTGAACTAGAAAATGCCACCGAAAACTTTTCAGCTTCCAACCTAATTGGTCTAGGTGGAAGTAGTTATGTATACCGCGGTCGGTTGAAAGATGGTAGTAATGTCGCGGTTAAGAAACTAAAAGATAAAGGGAGACTTGAAGATGATTCTGAATTTTCCACAGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCGTTGGTCGGATACTGCTCGGAATTAAAAGGAAAACAAGCTCAAAGGTTAATAGTGTTTGAGTACATGACACATGGAAATTTGAGGGACCGTTTAGACGGAGTTTTTGGAAAAAATATGGATTGGTCAACACGTGTGACAATTGCATTAGGAGCTGCAAAGGGCTTGGAATATCTTCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTGAAATCAACAAACATTCTTCTAGGTGAAAATTGGCAAGCAAAAATAACTGATCTCGGTATGGCTAAAAACTTGCGAGGCGATGACATTGCCGGTTGTCCAGATTCTCCAGCAAGTATGCAAGGGACATTCGGCTATTTTGCACCCGAGTATGCAATTGTTGGGAGAGCCTCTCTTGAATCAGATGTTTTCAGCTTTGGGGTGGTTCTTCTTGAGCTTATCAGCGGCCGGCAACCCATCCATAAATCGGCAGGCAAAGAAGAAAGTCTTGTTATATGGGCAAGTCCTCGATTGCAGGATAGTAAGCGAGTAATAACAGAGTTGGTCGATCCACGATTGAAAGGAAACTTCCCCGAGGAAGAGGTACAGATAATGGCATACTTAGCAAAGGAGTGTTTGCTTTTGGATCCGGATACTCGACCAACCATGAGTGAGGTTGTTCAGATTCTTTCAAGTATTTCACCAGCCAAATCTAGGATGAGAAGGAGCATTTCAGTGAACCTTTTTGAGGAACCAGAGGATGCAGAGAAGCAAAGACAAGCTCCATCAAATAGATTTCCGGCTCGACATTTATCGACACTAGAAAGTAACCACAATCATTTTGCTGGGAAGGAAAATAAAGATGTAGGAACAGTTTCAGTTGAGTATATGGATAGTTTAGTCCATTTGAGTTCAAAAGGTGAGAGCTGGCATGCATCAGAAGAAGAAATGGTAGACTTAACTGAGCCTCAGTTTGAATCATTTTGCATTTCAAATGTTGAGATTCCTTGA 1833 0.4092 MKPQFKVAVALVISLVSIHPSFCGEPSDHGLNKWKCRCSSFLGNQGHSLPNCSESCDCHSDAKESSSKWTCICDPNGFPKVAADGHRNNCFKSCNCTWGTIRMPLGSKKHISSKIVVAILSICVVCTTIAIVASAACYVNRKERSTIHSPMILSDKETSYNSSSNLFSHRISSVPETKVTINSPISHITGCFQKICFLFGSQKETFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGRLKDGSNVAVKKLKDKGRLEDDSEFSTEIELLSRLHHCHLVPLVGYCSELKGKQAQRLIVFEYMTHGNLRDRLDGVFGKNMDWSTRVTIALGAAKGLEYLHEAAAPRILHRDVKSTNILLGENWQAKITDLGMAKNLRGDDIAGCPDSPASMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSAGKEESLVIWASPRLQDSKRVITELVDPRLKGNFPEEEVQIMAYLAKECLLLDPDTRPTMSEVVQILSSISPAKSRMRRSISVNLFEEPEDAEKQRQAPSNRFPARHLSTLESNHNHFAGKENKDVGTVSVEYMDSLVHLSSKGESWHASEEEMVDLTEPQFESFCISNVEIP* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1931 610 Pfam Protein kinase domain 227 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1931 610 CDD STKc_IRAK 231 507 - -
Lan6g1931 610 SUPERFAMILY Protein kinase-like (PK-like) 206 504 IPR011009 -
Lan6g1931 610 ProSitePatterns Protein kinases ATP-binding region signature. 231 254 IPR017441 GO:0005524
Lan6g1931 610 ProSiteProfiles Protein kinase domain profile. 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1931 610 PANTHER OS01G0253100 PROTEIN 2 604 IPR045271 GO:0004714|GO:0006468
Lan6g1931 610 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 604 - -
Lan6g1931 610 Gene3D Transferase(Phosphotransferase) domain 1 306 525 - -
Lan6g1931 610 SMART serkin_6 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1931 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Lan6g1931 610 Gene3D Phosphorylase Kinase; domain 1 199 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1931 Lan-Chr6 30282614 30286901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1931 1 608 Receptor kinase-like Gene Family AT2G28250 50.977 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lan6g1931 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1931 - - gmx:100499641 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1931 6 30282614 30286901 Lan7g0308 7 2004568 2009883 PCT
Lan6g1931 6 30282614 30286901 Lan8g1657 8 23546282 23552324 PCT
Lan7g0308 7 2004568 2009883 Lan6g1931 6 30282614 30286901 PCT
Lan8g1657 8 23546282 23552324 Lan6g1931 6 30282614 30286901 PCT