Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1929 ATGGCAAATGGTACACATTCTAGTCACAAAGGTAAGGGTGAAGAAATTAATAATAGGAGGCCAATGCAAGTTGGTGAGAAAGAAAAAATAAATCCTCCTTCTAATGTGTCAGATGCAACTGGTCTTAGACGGTCTACTAGGGATGCATCATCAACGAAGTTGACTACAAGCCCTTCAACTACTCGGAAGTCTGAGCGGCTTGAAAAGAAAACAACACCAACTCCTGCAGTTTGTAGGAAATCTCAAAAGTTTGAGAAGCCAAATATGCCAAGTCCTTTGAGGAGATCTGGAAGAAATAAGACTCACTGCTTTTCGACTCCTTCAGATTCTAAAAGTTCAGGGTCATCAAGTTCAAAGCAGAAGACAAAAAAAGAGAAGACTGTGAAACAGTTGACATTTGAAGCTAAGGAAGTCACTGAAAATGATGAACACGATGTGGGAGCTCCCCAGGTTAAAGTAAAAAGAATGGATGCCCGTATGTACAGGGCTACCTTTATAAAACCAAAGAGAGATTGCCTTGAGAAGCCAAATACAATTGATAAGTCAACTCAGGAAGGTGGCACTGATGGTGGAGGCAAGATTGATGAGTGCTGCAGGTTGAGTGGGCATGTAAAAGGTCTGTTGGAAAATAATTCCGCTCTAGGTTCATCGGTACCATCTAATGCCACAGCTCATGAGACTAGGCAGGCACCTCAAAGTGTTCAGCTTGATTGCAATGGAGAGGAGACATCACAGATGTTAGTTTCAATGAATGCGGTATCAGATGAAAATTTGGTTGGGAGCAATGTTGGGCTTGATAGTGGTGAAAAAATGATAAAGAGAAAAGGAACCACAGTGGAGAAGGTTTCAAATGTGTACTCTACCTTGTCTAATGATAAAAATTGCACCTTGATTGGTGAGGCTGGCCCTTCAAGGCTAGGTGGCAATATTGTGGGGACTGACAGCCCATGTTCCAAACGAAGAAGGTTGGATTATGATTCTACAGTATCCCATTGTAATGAATCCTGTAACCCTTCTACAGTTGAGGAACCAGGCCGGCCAAGCTCTGTTAATAAATTATCTCAGTTGCCTGGAAGAGTTTCTTCTAGATTGGGTAACAACAATCTTTTGGAGGCAGTGAACAAATTACGTGAGCATTGGCAGAAGGGCCAGAGCGCTATTGTAATTGATGACCATGAAAGAATTTTGAAAGTGGTTGCATTTATCGCAACGTTGCAGTCTGATATTTATCGTCCTTTCCTCATAATCTCAACTGCTGCTTCTCTCCATTCATGGGAGGATGAATTTAACCAGTTGGATCCATCTATAGATGTTGCAATTTACAATGGGAACAAAGAGATGCGTAACAGTATAAGGAGATTTGAATTATATGATGAAGGAGGTTGTATACTCTTCCAGGTGCTCATAGTTGTTCCAGATATCCTGATTGAGGATTTAGATGTTTTGGTAGGCATTGAATGGGAAGCAATCATTGTGGATGAATGCCAATCCCCTAAAATCTCTTCTTATTTCAAGCAAATTAAGATGTTGAACACACATCTAACGGTTCTACTTTTCCGTGACCAGCTAAAGGATAGTATTGAAGAAAACATTAATATTCTGGCTCTCCTTGATTGTCAAAGTGGTAATGAAAAAGATGGTTCAACATCTAATTCCAGTAACAATATCGTTGAGCTGAAGAAGAGGTTGTTAAGTCATATTGCATATAAGTGCCAGACTGACTTCTTTAGGTTTGTTGAGTATTGGGTTCCTGTACAGATATCTTATGTGCAGCTTGAGCAGTATTGTGGTATTTTGCTTTCTAATGCTTCAATTCTTCGGTCTTCGTCAAAAGTTGATACTGCTGGGCCTCTTCGTGATGTTCTTAATTCAACCCAGAAGTGTTGTAATCATCCTTATGTTCTTAATCCATCCCTGCAACCTTTGCTTACTGAGGGCCTTCAAACGACATCACCTGAGTTTCTGGATGTTGGTTGCAAAGCAAGTGGCAAGCTACAACTTCTTGATTCAATGCTCAAGGAGTTGAGAAAAAAAGATTTACGAGCACTCGTTCTTTTTCAGTCTATTGGTGGTTCCGGTATTTTGGTCGACTTCCTGCTACTAAGATTTGGTCAAGATTCTTATGAAGGGATCGATAGATCTTCTCCAATGAGCAAGAAGCAATCTGCCATGAAAAAGTTTAACAACAAGGACAATGGATGCTTTGTCTTTCTGTTAGAAACAAGTGCTTGTCATTCAAGTATCAAATTGTCATCAGTTGACGCTGTTATTATATTTAATAGTGATTTGAACCCAATGAATGACGTAAGATCTCTTCAGAAGATAACACTTGATTCACAGTTTGAGTTCATAAAAATATTCCGTTTATATTCATCTTTCACTGTTGAAGAAAAAGCCTTAATATTTGCGAAACAAGATAAGACCCTTGACATCAATATACAAAATATAAGCCCAAGTACCACTCATATGCTGTTGATGTGGGGTGCGTCTTGTCTATTTGATGATTTGAGAATCTTTCATGATGGTGAAACTTCTGTCTCAAGTCTAAAATCCTTGTTTGGTGGAGAACCACATTTAAAAGCAGTCCGTGAATTCTCATCCATACTATCTCAGGATGGTGAAAATAATGACACAAGCAACTGTTCATTTTTACTGAAAGTCCAGCCAAATGGGGGGAAATACCGTGGAGATTTTTCTTTGCTTGGTGAGCAGAAACTTAAGTTCCTAGATGAAGAAGCACCCCATATTTTTTGGACAAAACTTCTGGAGGGAAAACAATTTAAGTGGAAATACTCATGTGGCTTATCTCAGCGGAGCCGTAAAAAAGTTCATCAGGTTAATGGTTCATTAGATAGGCCTGATCTTGTGAGTGAAAGCATCTCAAAGAAGCGTAGGAAAGTGAGCAACAATACTATTGTTGATCAGCCTTCTTCAAAATCTGGTGGTCAGAAGTTATCTGCGGGAGTCAAGGCAGGAACGTCTAAAAATCCGTCTGGAGGTCTGGCCGGTGGGGATCCCAGTAATGGTGTTGAATCAGAGAAAAATAGTAGACTGCATGATGAGCAGAGGAGTTTACATCTTTTGCTGAAGCCAAATATTACAAAGTTCTGCGAAGTTCTTCTTCTACCAGATAATGTCAAGAGTACCGTGGACAACTTTCTTGGATACGTTATCAACAATCATCGTGTCCCTAGGGAACCAGTGTCAATATCACAGGCTTTTCAAATATCCCTGATTTGGGCTGCTGCTTCTTTTGTAAAGCATAACCTTGACCAGAATGCTTCTCTTATTCTTGCGAAAGAAATTTTGAATTTTGACTGCAAGAAGGTAGAGGTGGAGTATCTATATTCAATGTTGCGGTGTCTAAAGAATATATTTTTATATCGCACAGGAATTTTTGGCGATACTGGTTCTCCAAAGGCTTCTGAATCACGTCATGGGGTTTATTCCTGTACGGGACGAGAAGTTGAGTTGTTCAAAAAAGATATTTCCAAAAGTATTAAAGAAACTAAGAAGAAGTTAAAAAAGAAGCTGACAAAGCTATTTTCTATGCAACTGGAAGAGAAGCAAAAATTGAAAGCAGCTATTGAGGATGAAAAGGCTTACTTTGAGAGTAAGTACAAGCTAGAGTCAGCAGCTATTCAACGTTGCTCTCCTAATGATGTGGTAAGAGAAGAAAAGCTCAAGGATTTGAGTAGCGAATATGATAACAAAATTGGAGAATTGAAATGCGAGCATGAAACACGTCTCAAGGATCTTGAGGACATGCAGTCAGCTAAAATACGAGACTTTCAAGATCAGGAGGCTGCTTGGGTGGAAGAGCTTATGTCTTGGGCCAAAAATGAATTGTCAAACATAGATGTTTCAAAGGAACTTGGTAATGAGGTTGAATACTTGCAGACTTGTGATGAAGCACTGCCTCACAATGGTCTAAAGAATGTGGACCTTGTGTCTGGTCATTTTACTGAAGGAAAGGGTCATGATGATATGGTTGAAGCTATGACAGGAACCACGACTGGGGTTCCTGAAACCAATTCCCCTATACTTGAATTATGCAGTGGACCAGTTGAACTGCAAACTCCTTTGGCCCAGCCTATCGGTGCTAATGGAATGAGCATTATGGCTTCAGAAGATCGACCAGTCTCTCGACATGAGGACCATAATATAGCTGAGAATGAGAAGATTTTTTATGGTAACACAAGTACTGTAGATGAAGGTTATGGGCGTGAAAATTTTAGCCGTGGATCCAGAGACCCTGTAGATGAAGTTTTAGATAGAGAGTTGTCAAGACCATGTGGATCTACCAGTCCAAGTAGTGGTCCACCTAATATTACCCTTTCAAATTCACCTCTAGAGCACCAAAATCGCGATGGTGTCTCATCTTGCATACATGATGGACAATTTCCAGTTGAAGTGCCAGAAACTATTCATGAATGGCGCACAGTAAGTGTATTAGAAAGAGAGATACCTGCAGAAATACCTGGGGTTGCCAATTTTACTGATTGTCCAGCGAGTGCAACTCCTGTGGACAATCCTTCTGAAAATCAAATAACTATAGGAGATTCAGTAGATGTCCCAGTTTTAGATAATGTTTTGTCATCAAGACCCTGTGGAGCTGCTAGTCCAAGAGGTGGCACAGTTACTGATCCCATTTTGAATCAGCAACAAAATTTTGATGAAGTCTCTTTTAGTATACCCGATGGAGATATTCCAGTTATAGTGCCGGAAAATAGTCATGCAGTGGCTGATTGTCATAATAATGTGGAGCCTTTAACAAATGCTGGGTTGGTGCGTACTACATCTGGACAGCGGGAAGGAGTGCCTATAATGATGACAGAATGCACCTTGTCCCAGGATACTCCAATATCTAGATCAGTTGATGCCATGGAGTCTCCAGAACAAGTGCAGCAATTAACATCTGCAGAATCCCCCCCTGACCAGGATATAGCAGGAGAAATGCAGAACTCTTCCAAACAAGTTGGGCTGGTTTCTAGTCCAGTTGATATTATACCAGCCAATCAATCCAATCATGCTTCACTGAGCACGAGTCCTTCAGAGTTGGTGCAGCAATTAACATCTTCTGAGCTCCCTTATTCCAACCCAGATCCATCTAACATACATTTGGTACCTGCAGTTGAACATCAGCCCATCAATGAAGATGATCTCCCCTTCCATGATCCCGAGACATCAACTGTGGTTCCAAATCAAGATGTTGTGCAACCTGACCCAAATTTGGGACTAGATTCACATTCTCGTCAAGTTCTTATGCATCCTGCCTCAAATTCAAACCTGAGTTCACTTGCCCCTGGTGGGGTTGGAACACAGCCTTCAGACACAAGAAATTTGTCAACTCTTTCAGGGATCAGTCATCATAATCATCCTATCCAAACTGCAACCCATTCAGCTTCCGGATTTCTTCCGCCTTTGTGCTCTGAACCACTTAAGTATGAATTGGAAAGAATACAACAAGTAACAGAGAAAATTAAGCAAAACCATGAAGATATGAAATTACAATTGAAATCTGATTTTGAAAAGGAATATGCGGAACTTCGCATGAAGTATGACATCAAGTTTCAGGAGATCGAGGTTGAATTTCAGCAAACAAGGAAGAACCTGGATACAAGTCTCCATGCTGTTCTCATGAATAAGATATTGGCAGATGCTTTTAGGTCTAAATGCATGGTTCTTAAACCATCTGGTGCATTAGGAATACACCAAGATGCAGGTGCTGCACACCAATTTCCTCAGCATTCAAGACATCGTGGTGCAACACACCTGCCCATGGTTGCTGGTCCATCTCCTTCTTCTGCACCTCCTGCACCCAGTCTGCATAATCCCTCTACTACGACGACCCCTCAGAATGTGGCCGCGCCTATACAGCCTGCTTATAGGACATCTGGAGTTTTCTCCAGTGTTCCTGCAAGACCACCTCTTATCAACTCTGTCTCTTTGCCATTGGGAGGTTCAAGACCACCTCTTATCAACTCTGTCTCTTCACCATTGGGAGGTCTCCAAGCTGGCAGTGAGATTCGGGCTCCCGCACCACATCTCCGGCCTTATAGTTCCTCCACATCTGTGCCAGCTACCAGTGTCCCTGCTCTTCCGCAAGGGATTCCACGTCAGCCAGCACCTAGTAACATCCCTGCAAGTTCTGCATTTTCTCACGGTCCACCTCGACCAAGACCAACAACCTATCAGTCTGATCCTCATTTGGGACGTCGGCCTGATAATGCAGGTGGGTTACCCAGTGCCAACTTATCTCCTGTAGACCTCCCAAATGTCCGGCCACCACCGTTGTCACATGATACTTCATTAAACCCACCTAGAGTTCGCACTGTTAACTCGTCCCATGAAGCTCCAGATTATGTCTATTTATCAGATGACGACTAA 6390 0.416 MANGTHSSHKGKGEEINNRRPMQVGEKEKINPPSNVSDATGLRRSTRDASSTKLTTSPSTTRKSERLEKKTTPTPAVCRKSQKFEKPNMPSPLRRSGRNKTHCFSTPSDSKSSGSSSSKQKTKKEKTVKQLTFEAKEVTENDEHDVGAPQVKVKRMDARMYRATFIKPKRDCLEKPNTIDKSTQEGGTDGGGKIDECCRLSGHVKGLLENNSALGSSVPSNATAHETRQAPQSVQLDCNGEETSQMLVSMNAVSDENLVGSNVGLDSGEKMIKRKGTTVEKVSNVYSTLSNDKNCTLIGEAGPSRLGGNIVGTDSPCSKRRRLDYDSTVSHCNESCNPSTVEEPGRPSSVNKLSQLPGRVSSRLGNNNLLEAVNKLREHWQKGQSAIVIDDHERILKVVAFIATLQSDIYRPFLIISTAASLHSWEDEFNQLDPSIDVAIYNGNKEMRNSIRRFELYDEGGCILFQVLIVVPDILIEDLDVLVGIEWEAIIVDECQSPKISSYFKQIKMLNTHLTVLLFRDQLKDSIEENINILALLDCQSGNEKDGSTSNSSNNIVELKKRLLSHIAYKCQTDFFRFVEYWVPVQISYVQLEQYCGILLSNASILRSSSKVDTAGPLRDVLNSTQKCCNHPYVLNPSLQPLLTEGLQTTSPEFLDVGCKASGKLQLLDSMLKELRKKDLRALVLFQSIGGSGILVDFLLLRFGQDSYEGIDRSSPMSKKQSAMKKFNNKDNGCFVFLLETSACHSSIKLSSVDAVIIFNSDLNPMNDVRSLQKITLDSQFEFIKIFRLYSSFTVEEKALIFAKQDKTLDINIQNISPSTTHMLLMWGASCLFDDLRIFHDGETSVSSLKSLFGGEPHLKAVREFSSILSQDGENNDTSNCSFLLKVQPNGGKYRGDFSLLGEQKLKFLDEEAPHIFWTKLLEGKQFKWKYSCGLSQRSRKKVHQVNGSLDRPDLVSESISKKRRKVSNNTIVDQPSSKSGGQKLSAGVKAGTSKNPSGGLAGGDPSNGVESEKNSRLHDEQRSLHLLLKPNITKFCEVLLLPDNVKSTVDNFLGYVINNHRVPREPVSISQAFQISLIWAAASFVKHNLDQNASLILAKEILNFDCKKVEVEYLYSMLRCLKNIFLYRTGIFGDTGSPKASESRHGVYSCTGREVELFKKDISKSIKETKKKLKKKLTKLFSMQLEEKQKLKAAIEDEKAYFESKYKLESAAIQRCSPNDVVREEKLKDLSSEYDNKIGELKCEHETRLKDLEDMQSAKIRDFQDQEAAWVEELMSWAKNELSNIDVSKELGNEVEYLQTCDEALPHNGLKNVDLVSGHFTEGKGHDDMVEAMTGTTTGVPETNSPILELCSGPVELQTPLAQPIGANGMSIMASEDRPVSRHEDHNIAENEKIFYGNTSTVDEGYGRENFSRGSRDPVDEVLDRELSRPCGSTSPSSGPPNITLSNSPLEHQNRDGVSSCIHDGQFPVEVPETIHEWRTVSVLEREIPAEIPGVANFTDCPASATPVDNPSENQITIGDSVDVPVLDNVLSSRPCGAASPRGGTVTDPILNQQQNFDEVSFSIPDGDIPVIVPENSHAVADCHNNVEPLTNAGLVRTTSGQREGVPIMMTECTLSQDTPISRSVDAMESPEQVQQLTSAESPPDQDIAGEMQNSSKQVGLVSSPVDIIPANQSNHASLSTSPSELVQQLTSSELPYSNPDPSNIHLVPAVEHQPINEDDLPFHDPETSTVVPNQDVVQPDPNLGLDSHSRQVLMHPASNSNLSSLAPGGVGTQPSDTRNLSTLSGISHHNHPIQTATHSASGFLPPLCSEPLKYELERIQQVTEKIKQNHEDMKLQLKSDFEKEYAELRMKYDIKFQEIEVEFQQTRKNLDTSLHAVLMNKILADAFRSKCMVLKPSGALGIHQDAGAAHQFPQHSRHRGATHLPMVAGPSPSSAPPAPSLHNPSTTTTPQNVAAPIQPAYRTSGVFSSVPARPPLINSVSLPLGGSRPPLINSVSSPLGGLQAGSEIRAPAPHLRPYSSSTSVPATSVPALPQGIPRQPAPSNIPASSAFSHGPPRPRPTTYQSDPHLGRRPDNAGGLPSANLSPVDLPNVRPPPLSHDTSLNPPRVRTVNSSHEAPDYVYLSDDD* 2130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1929 2129 MobiDBLite consensus disorder prediction 942 961 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 212 232 - -
Lan6g1929 2129 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 346 2103 - -
Lan6g1929 2129 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 37 333 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 1627 1660 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 335 354 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 2014 2129 - -
Lan6g1929 2129 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 346 2103 - -
Lan6g1929 2129 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 37 333 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 94 117 - -
Lan6g1929 2129 Coils Coil 1818 1838 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 1924 1954 - -
Lan6g1929 2129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 574 804 IPR027417 -
Lan6g1929 2129 CDD SF2_C_SNF 662 768 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 970 993 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 1426 1455 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 1674 1699 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 8 26 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 1431 1455 - -
Lan6g1929 2129 Gene3D - 578 810 IPR027417 -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 966 1017 - -
Lan6g1929 2129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 516 IPR027417 -
Lan6g1929 2129 Pfam SNF2-related domain 396 633 IPR000330 GO:0005524|GO:0140658
Lan6g1929 2129 Gene3D - 370 577 IPR038718 -
Lan6g1929 2129 Gene3D - 1810 1892 - -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 1 128 - -
Lan6g1929 2129 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 667 824 IPR001650 -
Lan6g1929 2129 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1929 Lan-Chr6 30251316 30267921 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lan6g1929 SNF2_N 8.5e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1929 - K11643 lang:109350993 4156.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1929 6 30251316 30267921 Lan8g1656 8 23534256 23545215 PCT
Lan6g1929 6 30251316 30267921 Lan13g0389 13 2629855 2639299 PCT
Lan8g1656 8 23534256 23545215 Lan6g1929 6 30251316 30267921 PCT
Lan13g0389 13 2629855 2639299 Lan6g1929 6 30251316 30267921 PCT