Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1928 ATGAACAACTCAAGGCACGAATCTCATGTAGCACAACAAATTCGGCGCGATAAGTTGCGAATCCAGAATAGCTTCCATCATCTACAAGAATTTCCGAACAATAATCCAGAACAATTGTCATTGCACCAAGGGTTCGACTTAGATATTCAAGTTAGGAATGTTAGAAATGCTAACATGCTTGTTGATGAATCTGCAGCTGTTTATTCTTCAGAAATGGCGAAAATTTCAAACCCTTCACCTCCTCCAAGGAACAATAATACTTTGGGGTATGAGGAACTAGGAGAAGCTGAACCTATTAAGCTAATGATGCATCAGCATGGTTTAGTTCCCCATTCATATAACAGTTTGGGCAATGAAAACACTTTTTTGGCTTCTGAGCTCAATAATAATGTGTTTGGTTACCAGCACTATGCAAAGCAAAGTTACAATGAACTCACAGATACACAGTCTTCTCTTAGTAGAGAAATTCAGAAGCAATTAGGCGTAAATGTAATGCATCATTCATCGTCTTCTTCGTCATATCAGAATGCTTTGCAGGATATTGTGAAGTCATCGGCTTCTATTGTCGTCTGCAACGGTTCACACACAGGTTCGCTGATACAACAAACTAGTCAAAACATTTGGGGAGGAGATCCAAATGAACTAGAACAACTTCAGCCAAGTTATGCAAATCAACCAAATCATGAACCGCGTTTCGGGAGTGGTAATTTGTGGGCTAATAGGCCTCACCCGAGTGATTCAACTCCTCGGAGTTTGTCTTTGTCACTTTCATCGAATTCACAATCCAAGCCTTCTGTTTCTCATTTTGAAGAGGCTTCTGCATCTGCATGTATATCAGATCATGGCATTTCTAAGCACCCTCCTCAATATGTGAAGCCATCTATCATTTCTAGAAATTCTGGGAAATCACCACTTCAAGACTACATAGTGATACCTAATCCAAACCCGACAAGTTACCGAAATGTAGGTCCTCTTGGCCCTTTCACTGGGTATGCTACTATTCTCAAGAGTTCAAGATTCTTAAACTCAGCTCAGCAGTTGTTAGAAGAGTTCTACTGTGTTTCTCATCCAAGATTTGCAAATGTATTTGATCTTCCAAAAAGGGTTTCTGGAGAAGTTAATGCTTCTACTTCTCCTTCTGCTGATACTGTCACTATCAATGAAACTGAAGGGTTTGCTCCAAAAGGTGGTAACTCAGGTTCTTCATCTTCTATGTTCTATAGTGCAAATGAAAATAGCACTAATAGGGGATCAATGAGTAGTTTTGGTCTTTCTCCAATTCCAGATTATCAACAGAAGAAGGCAAAACTACTGTTCATGCAAGAAAAGGTTGGCAAGAGATACAAGCAATACCATCAACAAATGCAAACGATTGTTTCATCCTTCGAGTCAGTAGCGGGTCTTAGTTCCGCTACTCCTTACGTTTCCTTGGCTCTCAAGTCAATATCAAAACACTTCAGGTGCCTTAAAAATTCAATCTCAGATCAGCTCAAGCACATAACTGAAGTCTCGGGTGAGGACATACCAAGTACCAGTACAAGTAGTAAAGTTGACACTAATACGGCAAATCCAAGTTGCATGGACCAAAGCTTTCAAAAGAACAAAGTTAGCCGAAGTAACATGTGCCTTCATGAACCCCAACAGCATGTGTGGAGGCCTCAAAGAGGCTTGCCGGAACCTGCAGTGGCAATCCTTAAAGCTTGGTTATTCGAGCATTTTCTTCATCCTTACCCTACAGACAATGATAAGCATATGTTGGCTACTCAAACAGGTCTATCGCGAAACCAGGTATCGAATTGGTTCATAAATGCTCGTGTCCGTCTATGGAAGCCGATGGTCGAGGAAATACACATGCTTGAAACAAAAGGCACAATCGGTAACAATACTAGTAAAAATGAAGGAACTTCATGCACTGAAGGTGGTAGACTAGATAAGCCTCTAAGTAAGTTTGGTATGCATTCAATCACTGAAAGCCAATTTCAGTGCAATAATGCTGAGGAAAATGGAACAAATGATGAAGAACAATGGAGTCAAGAGAAAAGGTCTAAGTTGGAATTCCAAATGATGGGTTTTGTGCCATACCAAAGTGGAGGAGCACTTGGATCAGTGTCATTAACATTGGGTCTTAGGCATGGTGTTGAAGGTGCACAAAATCAACAACAATTACAAGAGGAGCAGCTTATACCTCACTTTGGAGGGCATATATATCATCATTGA 2217 0.4046 MNNSRHESHVAQQIRRDKLRIQNSFHHLQEFPNNNPEQLSLHQGFDLDIQVRNVRNANMLVDESAAVYSSEMAKISNPSPPPRNNNTLGYEELGEAEPIKLMMHQHGLVPHSYNSLGNENTFLASELNNNVFGYQHYAKQSYNELTDTQSSLSREIQKQLGVNVMHHSSSSSSYQNALQDIVKSSASIVVCNGSHTGSLIQQTSQNIWGGDPNELEQLQPSYANQPNHEPRFGSGNLWANRPHPSDSTPRSLSLSLSSNSQSKPSVSHFEEASASACISDHGISKHPPQYVKPSIISRNSGKSPLQDYIVIPNPNPTSYRNVGPLGPFTGYATILKSSRFLNSAQQLLEEFYCVSHPRFANVFDLPKRVSGEVNASTSPSADTVTINETEGFAPKGGNSGSSSSMFYSANENSTNRGSMSSFGLSPIPDYQQKKAKLLFMQEKVGKRYKQYHQQMQTIVSSFESVAGLSSATPYVSLALKSISKHFRCLKNSISDQLKHITEVSGEDIPSTSTSSKVDTNTANPSCMDQSFQKNKVSRSNMCLHEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHPYPTDNDKHMLATQTGLSRNQVSNWFINARVRLWKPMVEEIHMLETKGTIGNNTSKNEGTSCTEGGRLDKPLSKFGMHSITESQFQCNNAEENGTNDEEQWSQEKRSKLEFQMMGFVPYQSGGALGSVSLTLGLRHGVEGAQNQQQLQEEQLIPHFGGHIYHH* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1928 738 MobiDBLite consensus disorder prediction 240 265 - -
Lan6g1928 738 SMART HOX_1 551 615 IPR001356 GO:0003677
Lan6g1928 738 MobiDBLite consensus disorder prediction 204 231 - -
Lan6g1928 738 Gene3D - 554 616 - -
Lan6g1928 738 Pfam Associated with HOX 334 494 IPR006563 -
Lan6g1928 738 SUPERFAMILY Homeodomain-like 553 618 IPR009057 -
Lan6g1928 738 MobiDBLite consensus disorder prediction 204 265 - -
Lan6g1928 738 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 31 713 - -
Lan6g1928 738 Pfam Homeobox KN domain 568 607 IPR008422 GO:0003677|GO:0006355
Lan6g1928 738 SMART prehox3 329 495 IPR006563 -
Lan6g1928 738 CDD homeodomain 551 612 IPR001356 GO:0003677
Lan6g1928 738 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 31 713 - -
Lan6g1928 738 MobiDBLite consensus disorder prediction 504 528 - -
Lan6g1928 738 ProSiteProfiles 'Homeobox' domain profile. 548 611 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1928 Lan-Chr6 30237595 30243864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1928 437 621 Homeobox Transcription Factor Family AT5G02030 56.085 6.16e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan6g1928 POX 5.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1928 - - adu:107461750 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1928 6 30237595 30243864 Lan3g0088 3 601805 607056 LSH