Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1927 ATGTGTAAGACCAAAATGGCCACAAACGCTTCCTCACCTACTCCACGCACACGCTCTCAACCTTCAACACAAACCAAAAAACCTTCAACACAACCCAACCGGCTACCGGCTACCGAACCACCCACCTCTTCCTCCGAACCATCAACCTCATACTCTTACAACACCGGTTCCACCGGCTACCGGCTAACCTCTGACACCTCAATCTCAAGCCGAACCTCTCTCTCCTCTCTCCGCCACACTCTCCCTGAAAACCCTCACATCTACGATTTCTCCGAGATTTCCTCCGCCACCAACAACTTCCTCTCCAAACGCCACTCTTCCTCCTCCGCCACCCCCTCCTGGCGCTGCATCCTCCGCGGCGCCGATGTTATTGTCTTCCAGCGCAAGTTCCGCCACAAACTCCAAACCGATGAGCTCCGACAACGCCTCTCCGTTATTTGCCGCAGCCACCACGTCAGCATCATCAAGCTCCTCGGTGCTTCTATTTCTGGTGATCATATTTACCTTGTTTATGAGTTCGTTAACGGTGCTAACCTCGCTGATTGTCTTCGGAATACGAAGAACGTTCACTTCACTGTGCTTAGTACCTGGTTGTCGAGAATGCAGGTCGCAACTGATCTTGCTCACGCGCTTGATTATGTTCATAATAAAACAGGTTTGAATATTAATATCGTTCATAATCATATCAAGAGCAGTGGAATCATCGTTACGGAGCCTTCGTTCAACGCTAGGGTTTGTCATTTCGGTGCTGCACAGCTCTGCGGCGACATTGAACCGGAAAACGAAACCGCCGCTCGGAAATTAGAGGAGATCGTGGAGGAAAAGTCGGATTCGTCATCGCCGGCGAGATCTAAGGAATTGAGACGGTCTGAGAGTAGGAGATTGCAATTCCAAGGCGTCCGAGGGTACATGTCGCCGGAATTTCAAGCCGCCGGCGTAGCGACGCAGAAATCTGACGTTTACGCTTTCGGCGTAGTGTTACTGGAGCTGTTGACCGGTGAGGAGCCGTTGAAGTTTCGATTTGATAAAAATAGCGGTGATTTCGTAAAAACTTCAGTGATTGACACGGCGAGGTACGCCGTAGACGGCGGCGGAGAAGGAAGCGTTGAGGGAAGGCTGAGAAAGTGGGTGGATCGGAGATTAAAAGATTCATTTCCGGTGGAGGTAGCAGAGAAGGTGACACGTGTCGCGTTGGATTGCGTACACGTGGATCCAGATAAGAGGCCCAATATGGGACGCGTGGCAGGTAAGATATCGAAGCTTTATTTGGAGTCAACGATTTGGTCTGAGAGTATTAAAATGCCTACTGGTATTTCTGTTTCATTGGCTGCAAGATGA 1338 0.5037 MCKTKMATNASSPTPRTRSQPSTQTKKPSTQPNRLPATEPPTSSSEPSTSYSYNTGSTGYRLTSDTSISSRTSLSSLRHTLPENPHIYDFSEISSATNNFLSKRHSSSSATPSWRCILRGADVIVFQRKFRHKLQTDELRQRLSVICRSHHVSIIKLLGASISGDHIYLVYEFVNGANLADCLRNTKNVHFTVLSTWLSRMQVATDLAHALDYVHNKTGLNINIVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGDIEPENETAARKLEEIVEEKSDSSSPARSKELRRSESRRLQFQGVRGYMSPEFQAAGVATQKSDVYAFGVVLLELLTGEEPLKFRFDKNSGDFVKTSVIDTARYAVDGGGEGSVEGRLRKWVDRRLKDSFPVEVAEKVTRVALDCVHVDPDKRPNMGRVAGKISKLYLESTIWSESIKMPTGISVSLAAR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1927 445 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 444 - -
Lan6g1927 445 ProSiteProfiles Protein kinase domain profile. 90 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1927 445 Gene3D Transferase(Phosphotransferase) domain 1 175 432 - -
Lan6g1927 445 PANTHER OS09G0572100 PROTEIN 1 444 - -
Lan6g1927 445 Pfam Protein kinase domain 132 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1927 445 MobiDBLite consensus disorder prediction 271 291 - -
Lan6g1927 445 MobiDBLite consensus disorder prediction 1 66 - -
Lan6g1927 445 SUPERFAMILY Protein kinase-like (PK-like) 125 414 IPR011009 -
Lan6g1927 445 Gene3D Phosphorylase Kinase; domain 1 61 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1927 Lan-Chr6 30227126 30228631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1927 83 432 Receptor kinase-like Gene Family AT1G51940 28.729 1.58e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan6g1927 Pkinase 4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1927 - - adu:107461746 617.076