Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1910 ATGGCTATTGCTGGTGTGCACAGTGTGGCTGTGGTTGACTCTACTTTCCTTAGGGACTCCCCTTCTCAGTCACCCGGGAGGCGAGGAGACGGAGAGAGAGGAAGTTCCCAGCCTTCTTCGATCTTGCAAATATGGCGAGAGATTGAAGATGAGCATTTGGTGAGTCAAGTTCAAGGAGGATCTGGAGAAGCGTTGCTTCAAGAAAGAAGTGATGGGTTGGTTCCGGAACTCTCTCAGGAAAGTATGCCTGATATCCGTCGAAGAGAAGGACATTTGATAGGAGATGCAGTTCTGGGGGAGAATGGATCTGAAGCATGTTCACAGTTACAAAGTCAGAGTGAGTCACATGATGAACATGTGGAATTAAACAATTCTAGTTCTGAAAACTCTTCCAATTTAGGAGAAGTTGAAAGGGGGAGAGTGAGGCAGATTTTCAGGGAGTGGATGATTAGTGGTGATAGGGATCATGCATCAAACATTTACCGAGGAAATAGTGGCTCAAGAGGAGAATGGCTTGAGGAAGTTGAGCAGGAAAGGGTGAGTGTCACGAGGGACTTGGTACAAACAAGTGGCCAGCAGAGCGCTGTTTCTTCTGGGGATAATAAGGAAGAACGGCCTTCTGAAATTGGTACCCAAGTTGAAAGTGTACGTGATGGCTTTGTTGTTAATCCGAATGAGGGCCAACCTGAGCATACACGGAGGGGAATCCGCAAAATATGTGGCCGACAAGTTCTACTTGATATGCTTAAGAAGGCTGAGATGGAAAGACAGAGAGAAGTTCAGGAATTGTTGGACCATCAGGCCGTTTCTCATTTCCCTCATCGCAATCGCATCCAGGCATTGCTCAGAGGAAGGTTCTTGAGAAATGATAGATCAGTTGATAATAACAGGTCTATTTCAATTGCAGAAAGTGAATTAGGCTTATTGAGGAAAAAACAGAGTGTATCAGGTCTAAGGGAAGGATTCTTTTCTAGAAAAGACAATTCTGGTTGCAGTCAAGCAACGAGCAACCTATCCGATACCTCATCTGTCAGTGATATTGATGTAAATACCATTGAAAAAACCGGAGCTAGCAGTCTGCATATGGTCCCAACTATACATTCTGAACAATCAGATGCTGGTAACAGGGGAAGTGACGATAGACCTGGGATATCGGGTGTACAAAATTGTTCACTAGGAATTGCTTGTGAGAATTTAGATTGGCAAGATTCTAATGCTAATGGAGAAACAAGAGAATGGGGATCATCATCCAGTATTGGGGTCACAAGAAGTGATAGCAGTGAACAAAATATTGATATGATGCCAACTGAAGGCACTGCTAATGATCTTGCCCAACAAAGCTTGCAAATTGAAGATACCAGGCATAGCAATATGCAGGAACTAACTGGTGTGCATACTGAGCAACCAGAGGTGATTGATATAATGGATGATGAAAGCAATTTATCAAATCACAACATTCATGTAGAGGGCAATATTGTTGAATGGAGAAATAGTACTGTGGAAAGTGTGGATGGTAATCAGCTCAGTAGCATATCGAATGAATGGCCCCAAAACACTTTAGGAGATGGTGTAAATTCTCGTCTGCAAGAAGCCCCTGAACCTGAAATGTGGCAAGAAGATGGTGACTTTCAAGAGGCTGTGGAGATTTGGTTAGGAGCACCTTCCGATCACGAAGTAGCTCAAGATGGTAGAGTTCATGGATTTTATTTTCCAGATGACAACAATGTGTACAGTGTTGAACTCAGGGAACTGTTAAGCAGGAGAAGTGTCTCAAACCTCCTCCATAGCAGCTTTCGGGAAAGTCTTGACCAATTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCCTGTTCAGTGGGAGCTGCAAGAACCAATCTCTCCTCCCTCGACAGAACAAGACCTGGAGCAGCAAAGCAGAAATCGGATTACTCGTCCGGAGGATACTATTAATAGTCCACTTGACCTGCCCTTGCCGCCACCACCACCACCACCACCTCGACCTCAATGGGATCGGCACTCGCGGCATGACAACTGGTCACAGAATGACATAAATAATCATCGCCTAGGAATAGACTGGGATATCATTGGTGACATGAGAATTGACATGGTTAGGCTACAGCAAAGGATGAATAATATGCAGAGAATGATGGAGACCTGTATGGATATGCAGCTTGAGTTGCAACGCTCAATAAAGCAAGAAGTTTCTGCTGCTCTAAATCGCTCAACTACTTCATCAGGAATAGATGACCATGATTCACAAAATGGCCAATCTAACTGGGAATGTGTTAGAAAAGGAGTTTGCTGCATGTGCTGTGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAATGTGCCAATGATTTGCTCCAAAGTAGAAGAAAATGTCCAATGTGTTATGCACCAGTAGTGGAAGTTATACGTGCTTATTCTATATAG 2460 0.437 MAIAGVHSVAVVDSTFLRDSPSQSPGRRGDGERGSSQPSSILQIWREIEDEHLVSQVQGGSGEALLQERSDGLVPELSQESMPDIRRREGHLIGDAVLGENGSEACSQLQSQSESHDEHVELNNSSSENSSNLGEVERGRVRQIFREWMISGDRDHASNIYRGNSGSRGEWLEEVEQERVSVTRDLVQTSGQQSAVSSGDNKEERPSEIGTQVESVRDGFVVNPNEGQPEHTRRGIRKICGRQVLLDMLKKAEMERQREVQELLDHQAVSHFPHRNRIQALLRGRFLRNDRSVDNNRSISIAESELGLLRKKQSVSGLREGFFSRKDNSGCSQATSNLSDTSSVSDIDVNTIEKTGASSLHMVPTIHSEQSDAGNRGSDDRPGISGVQNCSLGIACENLDWQDSNANGETREWGSSSSIGVTRSDSSEQNIDMMPTEGTANDLAQQSLQIEDTRHSNMQELTGVHTEQPEVIDIMDDESNLSNHNIHVEGNIVEWRNSTVESVDGNQLSSISNEWPQNTLGDGVNSRLQEAPEPEMWQEDGDFQEAVEIWLGAPSDHEVAQDGRVHGFYFPDDNNVYSVELRELLSRRSVSNLLHSSFRESLDQLIQSYVERQGHAPVQWELQEPISPPSTEQDLEQQSRNRITRPEDTINSPLDLPLPPPPPPPPRPQWDRHSRHDNWSQNDINNHRLGIDWDIIGDMRIDMVRLQQRMNNMQRMMETCMDMQLELQRSIKQEVSAALNRSTTSSGIDDHDSQNGQSNWECVRKGVCCMCCESNIDSLLYRCGHMCTCSKCANDLLQSRRKCPMCYAPVVEVIRAYSI* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1910 819 MobiDBLite consensus disorder prediction 186 210 - -
Lan6g1910 819 Pfam Zinc finger, C3HC4 type (RING finger) 766 811 - -
Lan6g1910 819 MobiDBLite consensus disorder prediction 653 668 - -
Lan6g1910 819 CDD mRING-HC-C3HC5_NEU1 768 806 - -
Lan6g1910 819 MobiDBLite consensus disorder prediction 186 200 - -
Lan6g1910 819 ProSiteProfiles Zinc finger RING-type profile. 768 806 IPR001841 -
Lan6g1910 819 MobiDBLite consensus disorder prediction 15 40 - -
Lan6g1910 819 SUPERFAMILY RING/U-box 767 813 - -
Lan6g1910 819 Coils Coil 696 716 - -
Lan6g1910 819 PANTHER PROTEIN, PUTATIVE-RELATED 513 819 - -
Lan6g1910 819 PANTHER PROTEIN, PUTATIVE-RELATED 1 461 - -
Lan6g1910 819 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 513 819 - -
Lan6g1910 819 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 461 - -
Lan6g1910 819 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 744 818 IPR013083 -
Lan6g1910 819 MobiDBLite consensus disorder prediction 625 682 - -
Lan6g1910 819 MobiDBLite consensus disorder prediction 102 136 - -
Lan6g1910 819 MobiDBLite consensus disorder prediction 407 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1910 Lan-Chr6 30082213 30087443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1910 - - lang:109350937 1614.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1910 6 30082213 30087443 Lan7g0465 7 3400639 3405348 PCT
Lan6g1910 6 30082213 30087443 Lan13g0485 13 3586774 3591675 PCT
Lan6g1910 6 30082213 30087443 Lan7g0332 7 2251451 2255911 PCT
Lan6g1910 6 30082213 30087443 Lan8g1633 8 23311401 23316980 PCT
Lan7g0332 7 2251451 2255911 Lan6g1910 6 30082213 30087443 PCT
Lan8g1633 8 23311401 23316980 Lan6g1910 6 30082213 30087443 PCT
Lan7g0465 7 3400639 3405348 Lan6g1910 6 30082213 30087443 PCT
Lan13g0485 13 3586774 3591675 Lan6g1910 6 30082213 30087443 PCT