Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1909 ATGCACGTAACACATAGCATGAAATCTGAGTTAAAGGGTAGTTCTATTTCCCTTCAAAACTCTACCAGCCTCTCTAACACTACACCACACAGTACACTTTCAGGGGCACTCAAAGGGTGTCTTGGAAGCCATGATGGAGCTTGTATAGAGAAGCTCTTATTACATTGTGCAAGTGCTTTAGAGAGCAATGATATCACCTTGGCTCAACAAGTTATGTGGGTCCTCAACAACGTTGCTTCACCCCTTGGTGACACTAACCAAAGGCTCACCTCATGGTTCCTAAGGGCACTAATCTCTAGGGCTTTAAGGATTTGCCCCACAGCAATGAATTTCAAGGGAAGCAACAACACCATTCAAAGGAGGTTGATGAGTGTGATCGAGCTAGCTGGGTATGTTGACTTAATCCCTTGGCATAGATTTGGTTTTTGTGCATCAAATAATGAAATTTTGAAAGCAATTGAAGGGTTCCATAGGGTACATATCCTAGATTTTAGCATCACTCATTGTATGCAATGGCCTACTTTTATAGATGATTTAGCTAAAAGGCCTGAAGGACCTCCTTCACTAAGAATCACTGTCCCATCTTGTAGGCCACATGTCCCTCCCTTGGTCAATATTTCAATACAAGAAGTTGGTCAACGTTTAGGGAACTTTGCTAAGTTTAGGGATGTACCTTTTGAATTCAATGTTTTAGGAAACACACCTCCAATATTAGTATCTTCTGAATTAGGCAATGAATCTAGTAGTTTTCATTTTGAGTCACTGTTGAGTCTTTTGAATCCTAGTGTGCTAAACCTTAGGGAAGATGAAGCATTGGTCATAAATTGTCAAAATTGGCTAAGATACTTGTCTGATGATATAAAGGGTAGCCCTCAAAACCTTTCTCTAAGGGATACTTTTCTGAATATAGTTAAGAGTCTTAACCCAAGGATTATGCTCTTGGTGGATGAGGATTGTGACCTTAGTGCACCAACTCTAACATCAAGAATCACTACATGTTTCAATCATCTATGGATACCCTTTGATGCATTGGAGACTTTTCTTCCTAAGAGTAGTAGCCAGAGGACAGAATATGAATCCGACATAGGCCAGAAAATTGAGAATATCATAGGATTTGAAGGGCATCAAAGGATAGAGAGATTGGAGTCTGGGATGCAAATGTCACAAAGAATGAGAAATGCTGGATACATGAGTTTACCATTTTGTGATGAAACTGTGAAGGAAGTTAAGGCTTTGCTTGATGAACATGCTAGTGGATGGGGTATGAAAAGGGAAGAAGGTATGTTAGTTCTCACATGGAAAGGAAACAGTTGCGTGTTTGCCACGGGTTGGGTCCCTAGTGATATGAGAGATCATATTGATATTGACGCGAATTAG 1377 0.4023 MHVTHSMKSELKGSSISLQNSTSLSNTTPHSTLSGALKGCLGSHDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRALRICPTAMNFKGSNNTIQRRLMSVIELAGYVDLIPWHRFGFCASNNEILKAIEGFHRVHILDFSITHCMQWPTFIDDLAKRPEGPPSLRITVPSCRPHVPPLVNISIQEVGQRLGNFAKFRDVPFEFNVLGNTPPILVSSELGNESSSFHFESLLSLLNPSVLNLREDEALVINCQNWLRYLSDDIKGSPQNLSLRDTFLNIVKSLNPRIMLLVDEDCDLSAPTLTSRITTCFNHLWIPFDALETFLPKSSSQRTEYESDIGQKIENIIGFEGHQRIERLESGMQMSQRMRNAGYMSLPFCDETVKEVKALLDEHASGWGMKREEGMLVLTWKGNSCVFATGWVPSDMRDHIDIDAN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1909 458 MobiDBLite consensus disorder prediction 8 26 - -
Lan6g1909 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 446 IPR005202 -
Lan6g1909 458 Pfam GRAS domain family 50 444 IPR005202 -
Lan6g1909 458 MobiDBLite consensus disorder prediction 1 26 - -
Lan6g1909 458 ProSiteProfiles GRAS family profile. 40 445 IPR005202 -
Lan6g1909 458 PANTHER OS05G0500600 PROTEIN 8 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1909 Lan-Chr6 30073383 30075202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1909 37 446 GRAS Transcription Factor Family AT3G49950 47.129 1.11e-124 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan6g1909 GRAS 3e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1909 - - gmx:100805056 761.14