Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1908 ATGGAATTTACAAGACCTGCTACTTATGTGGTTTTGTATGTCATTCTTCTTTGTGCTTTGGTCAAATGGGTTTCAGAGGGCAAGAGATGGAAACCCCATGAATTTTTTAAGGTAGAGCAAGTGTGGGAACATTGCAGGAAAGAATTGATAGAGAAGAACAATAATGATATTGAAGATTTTGACTTAGTAATGGAAAAGAACATAGACAAAGAAACTAGATTTCTACCTCCACATATGAAACAAACATTTTTGGAATGTATAAGAAAGAAAGTTCCTACTACTCCTGTTTTTGAAGAAGATGTGTCACTCTTTAGTATAGCATATGATCATGGAAGATATTTGATTTCTGAGTCACCACCAAGTCCTGTTACTGATCCATCAACACCACCAGATTCTCCATCATCAACTTCAAAGCCCTCATTTGAAGATTTACCACTTCCTCCGGATATGCTTGTGCTAATTCCACCACCACCACCTTCACCACCTCCTCAAACAAATGTTCATTCTAAGTATGACAACATGCAAGAAAAAGCAATTATTCTTGGTGCTTGTGCATCAGGAGTTATAATCTTTATAGGCTTGATCCTATGTTGTTGTGTGATTAGGAAGAGCAAAAAGGTTGACCAAGATGTGAAGCCTTTACTCACACTAAGCTCAAGTGATTTGTCTAGTGGTTCACAAAAATCTGGTAGTATGGAAGATTCTCTTAAGAAAGAATATAGTATTAACTATGGAAAGAACCTTTCTATTGTTAGGAAATCTTCCATTAAGCTTGAAGATAACAACACCTCACTACCTGAGACAACATTATCAGAAATCAAGGGACAATTACCGATCTCTATGCTAAAACCTCCACTAGCGAAACCAGTCCCTGAGCAGCCACAGCAACCGCCGCCACCACCACCTCCTCTCGCACCACGGCCACCACCACCTCCTAAAGTAGCTAGGCCTCCACCTGCTCCACCAAAAAAACCAGTGGCTGGTAGTGGAAATCAAATTTCGCCTTTAGGACCGCTTCGTGCTAGTGAGGATGGTGAAGAATCTGATGCACCAAAACCAAAGTTAAAGCCATTTTTCTGGGATAAGGTTGCTACAAATCCTGATCATGCAATGGTGTGGAATGATATTAGAGAAGGATCATTTCAGTTCAGTGAAGAAAAGATAGAGTCTTTATTTGGATTTACCACCCATAACAAAAATGAAAGAAGAAAAGACTCACCATCTCTAGAACCTTCGGTCCAGTACATTCGGATTATCGATCCTAGGAAAGCACAGAATTTATCAATTCTTCTTCGCGCTCTGAATGTGACAACAGAAGAAGTTGTTGATGCCATTAAAGAAGGTAACGAGATTTCCGTTGAGCTCATTCAGACATTGCTGAAGATGGTGCCAACAACAGAAGAGGAACTGAAGCTTCGGTTATTCACAGGCGAACTTTCTCAACTTGGCCCTGCAGATAGGTTTCTCAAGGTCTTGGTTGAAATTCCGTTCGCTTTCAAACGGCTCGAGTCTCTAGTGTTCATGTTCACACTACCAGAAGAGTCCTCCAGCATTAAGGATTGCTTTTCAACATTAGAGGTTTCATGCAACAAACTAAGAAAAAGCAGGCTCTTCCTAAAACTATTAGAAGCAGTTCTCAAGACTGGAAACCGCATGAACGATGGCACGTATCGTGGTGGCGCTCAAGCGTTTAGGCTAGACACACTTTTGAAACTGGCTGACGTAAAAGGAACCGATGGCAAGACAACACTACTACACTTTGTGGTTCAGGAGACTATTCGTTCCGAGGGCATAAGATCTGTAAGAACAGCTAAAGCAAGTAGTAGCTATTCTAGTATGAAAGCAGAGGATTTTGTTGAGGGTGGAAATGAAGATTCCGAAGAGCACTATCGCAGCCTCGGTCTGCAAGTAGTTTCAAGCCTAAGTAGTGAACTTGAAGATGTGAAAAAGGCAGCAGTTATAGACGGCGATGCGCTAACAGCTGCAGTGTCAAAACTTGATCAGTCATTGAAGAAAAGTGAAGCGTTGTTGAATAATGATTTGAAGAATGGCCAAGAAGAGTGTCAATTCCAACATTCTTTGTCGTGTTTCGTGGCGAAGGCAACAATTGAAGTGTCATGGCTTATAGAGGAAGAGAAGAGGATAATGGCTGAGGTTAAGAGCACAGCAGATTATTTCCATGGGAAAGCAGGCAAAGATGAAGGGCTGCGGTTGTTCGTGATCGTGCGCGATTTCTTGATAATGTTAGACAAGGTATGCAAAGAGGTGAAAGATAAAGCAGTTTTGAAGTCAGAAAAGGCTAAGAAAGAGTCTCAAACATCCTCTTCTAACACTCATCATAATAACTCACTTTCTGATGTACATAGGAGACTATTCCCAGCAATAGCCGAAAGGCGAGTGCATAATTCGAGTTCTAGTTCTAGTTCTGATGATGAGACTTAA 2442 0.4107 MEFTRPATYVVLYVILLCALVKWVSEGKRWKPHEFFKVEQVWEHCRKELIEKNNNDIEDFDLVMEKNIDKETRFLPPHMKQTFLECIRKKVPTTPVFEEDVSLFSIAYDHGRYLISESPPSPVTDPSTPPDSPSSTSKPSFEDLPLPPDMLVLIPPPPPSPPPQTNVHSKYDNMQEKAIILGACASGVIIFIGLILCCCVIRKSKKVDQDVKPLLTLSSSDLSSGSQKSGSMEDSLKKEYSINYGKNLSIVRKSSIKLEDNNTSLPETTLSEIKGQLPISMLKPPLAKPVPEQPQQPPPPPPPLAPRPPPPPKVARPPPAPPKKPVAGSGNQISPLGPLRASEDGEESDAPKPKLKPFFWDKVATNPDHAMVWNDIREGSFQFSEEKIESLFGFTTHNKNERRKDSPSLEPSVQYIRIIDPRKAQNLSILLRALNVTTEEVVDAIKEGNEISVELIQTLLKMVPTTEEELKLRLFTGELSQLGPADRFLKVLVEIPFAFKRLESLVFMFTLPEESSSIKDCFSTLEVSCNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLADVKGTDGKTTLLHFVVQETIRSEGIRSVRTAKASSSYSSMKAEDFVEGGNEDSEEHYRSLGLQVVSSLSSELEDVKKAAVIDGDALTAAVSKLDQSLKKSEALLNNDLKNGQEECQFQHSLSCFVAKATIEVSWLIEEEKRIMAEVKSTADYFHGKAGKDEGLRLFVIVRDFLIMLDKVCKEVKDKAVLKSEKAKKESQTSSSNTHHNNSLSDVHRRLFPAIAERRVHNSSSSSSSDDET* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1908 813 Gene3D Formin, FH2 domain 351 784 IPR042201 -
Lan6g1908 813 Pfam Formin Homology 2 Domain 347 749 IPR015425 -
Lan6g1908 813 MobiDBLite consensus disorder prediction 282 355 - -
Lan6g1908 813 MobiDBLite consensus disorder prediction 284 325 - -
Lan6g1908 813 SUPERFAMILY Formin homology 2 domain (FH2 domain) 298 765 - -
Lan6g1908 813 MobiDBLite consensus disorder prediction 764 786 - -
Lan6g1908 813 ProSiteProfiles Formin homology-2 (FH2) domain profile. 345 775 IPR015425 -
Lan6g1908 813 SMART it6_source 345 764 IPR015425 -
Lan6g1908 813 MobiDBLite consensus disorder prediction 118 169 - -
Lan6g1908 813 PANTHER FORMIN-LIKE PROTEIN 1 811 - -
Lan6g1908 813 MobiDBLite consensus disorder prediction 149 165 - -
Lan6g1908 813 PANTHER FORMIN-RELATED 1 811 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1908 Lan-Chr6 30068211 30072038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1908 296 800 FH2 protein (formin) Gene Family AT5G54650 53.546 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1908 - - lja:Lj3g3v2888350.1 724.931