Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1905 ATGGATTCTTCAGGTGCTTCTACTGGTTGGCTTTATGATTATTATGACTTTGATGTTGCTGGACATGACTTCATGGCTTTAGATTCTGATGCTTTTACTTGGCTGCCTCATACTCACACCTTCAATGATCCTTCTAATATGAGCTTGGAAATGGAATACTCACTGGATTCAACTATGCTGGAAAAAAGCCCTTCAAAGCGGTTTCTCGAATTGAGTTCTATCTTGGAGCCTGATAGGCCGTCAAAAGTAGACAAGGTCACTATACTAAGCGATGCAGTTCACGTCGTAACCAATTTAAGAAATGAAGCACAAAAGCTGAAGGATATGAATCATGAATTACTTCTAAAAGTTAAAGAATTGAAGGCTGAGAAGAACGAGCTTCGTGACGAGAAGAATATGCTGAAAGCAGATAAGGAAAGGTTGGAGCAGCAGATCAAACTGACAAATGTGCATCCTAGCTTCCTCCCCCATCCTACAGTTGCTAAAGGGGCACATGGTGTTAACCACAAACTGATACCTTTCGTCGGCTACCCTGGAATCGCGATGTGGCAGTTCATGTCTCCTTCTGTAGTTGATACATCAAAGGATCATCTGCTTCGGCCTCCAGTGGCGTAA 615 0.426 MDSSGASTGWLYDYYDFDVAGHDFMALDSDAFTWLPHTHTFNDPSNMSLEMEYSLDSTMLEKSPSKRFLELSSILEPDRPSKVDKVTILSDAVHVVTNLRNEAQKLKDMNHELLLKVKELKAEKNELRDEKNMLKADKERLEQQIKLTNVHPSFLPHPTVAKGAHGVNHKLIPFVGYPGIAMWQFMSPSVVDTSKDHLLRPPVA* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1905 204 Coils Coil 96 151 - -
Lan6g1905 204 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 66 204 - -
Lan6g1905 204 PANTHER BHLH TRANSCRIPTION FACTOR 66 204 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lan6g1905 204 Gene3D - 62 129 IPR036638 GO:0046983
Lan6g1905 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 123 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1905 Lan-Chr6 30055235 30058339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1905 10 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 42.609 2.12e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1905 - - gmx:100806838 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1905 6 30055235 30058339 Lan10g0046 10 261124 262719 LSH