Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1900 ATGGAGCCTCCTCCTATTTGTTCTATTGATTCTTTGTGTTCCAATCAAATCTCTTCTCTTCTCTCTCCTCCTTCTTCTCTTCTACTTGACCAATATTATCATACCCTTTTGTCTTCAACCCACTCTAGTGCCATCAATGTTCAACAAGATCCAAACTTTGGAAAGGGTGTATATGCTGCTATGCCCTTCAATGAAGGAGACCTTGTTCTTAATGACCGCATCTTTGTGGGGGTTCAACATTGTCAGAACAAGATTGATTGCTTTGTCTGTAGCTTCTGCTTTCGTTTTATTGGTTCAATAGAACTTCAAATTGGGAGGATGCTTTACTTGCAAGAAGTAAATGCTTCTGAGAATCACGGTTGTAATGAAATGGAAATGGACTCCTCTGATGAAGAAGAGAGTAGTCAGCAATGTGGTTCCGGTAGTTCCAGCAAAACTAAAATTCCTCTACCCGAAGGTGTTGTGGAATCATTAATGAATGGTCAATTGATATTGCCTTACTCTAAGGAGTTCCCTTTGCCATCACCTGTTCCATGCCATGGTGGATGTGGAGAAGTTTACTATTGCAGCGCGTCATGTGCTGAGGCTGATTGGGAATCCTCTCATTCATTACTCTGTACGGGCGAGAGGTCTGATCCAGCACGTAGAGAGGCACTTCTTAAATTTGTCAAACATGCTAATGAAACAAATGATATATTCTTACTTGCTGCAAAGGCTATTTCTACTACCATATTAAGGTACCGCAAGTTAAAAGCAAATAATTTTGATGAGCAAGTGAAACGTGATAAGTCTTATGATTCAAACAACCATAATTTCTCTCTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGATACAAGAGAAGGTGGTGGGACTGTGTTGCATTGCCAGAAGATATTGATTCTTCTGATGAAGCTTCATTTAGAATGCAAATAAAAGAACTGGCATTCAAGTCTCTTCAACTTCTGAAGACAGCTATATTTGACAAGGAGTGTGAGCCATTGTTCTCACTTGAAATCTATGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGACAGATCCGAATAAGGAAGAAGCCGAGAAAATTACACAACCTATTCTGGATGCTCTGGGTGAAGACTATTCTATTTGTTGCCAAGGAACTGCATTTTTTGCTTTGCAAAGCTGCATGAACCATTCTTGTTGTCCTAATGCCAAGGCTTTCAAAAGAGATGAGGATAGAGATGGCCAAGCAACAATAATTGCACTGAGGTCCATTTCTAAAGGAGAAGAGATAACAATATCTTATGTTGATGAGGACCTTCCATATGATGAGAGACAAGCATCCCTTGCAGATTATGGTTTTAGATGCAGGTGCCCAAAGTGCATTGAAGAAGAGCCATAA 1443 0.3978 MEPPPICSIDSLCSNQISSLLSPPSSLLLDQYYHTLLSSTHSSAINVQQDPNFGKGVYAAMPFNEGDLVLNDRIFVGVQHCQNKIDCFVCSFCFRFIGSIELQIGRMLYLQEVNASENHGCNEMEMDSSDEEESSQQCGSGSSSKTKIPLPEGVVESLMNGQLILPYSKEFPLPSPVPCHGGCGEVYYCSASCAEADWESSHSLLCTGERSDPARREALLKFVKHANETNDIFLLAAKAISTTILRYRKLKANNFDEQVKRDKSYDSNNHNFSLLLEAWRPISMGYKRRWWDCVALPEDIDSSDEASFRMQIKELAFKSLQLLKTAIFDKECEPLFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYIDDLTDPNKEEAEKITQPILDALGEDYSICCQGTAFFALQSCMNHSCCPNAKAFKRDEDRDGQATIIALRSISKGEEITISYVDEDLPYDERQASLADYGFRCRCPKCIEEEP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1900 480 MobiDBLite consensus disorder prediction 133 147 - -
Lan6g1900 480 MobiDBLite consensus disorder prediction 120 148 - -
Lan6g1900 480 Pfam SET domain 54 449 IPR001214 GO:0005515
Lan6g1900 480 Gene3D SET domain 372 479 IPR046341 -
Lan6g1900 480 Pfam MYND finger 177 206 IPR002893 -
Lan6g1900 480 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 16 479 IPR044237 GO:0008168
Lan6g1900 480 CDD SET_SMYD 389 475 - -
Lan6g1900 480 SUPERFAMILY HIT/MYND zinc finger-like 177 207 - -
Lan6g1900 480 Gene3D - 118 211 - -
Lan6g1900 480 ProSiteProfiles SET domain profile. 270 450 IPR001214 GO:0005515
Lan6g1900 480 SUPERFAMILY SET domain 43 475 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan6g1900 SET 8.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1900 - - aip:107613919 762.681