Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1898 ATGGGAGGCCAAAGTTACTATAAGGTTTTGATTATTTGTGTTGTGGCATTATTTGTATCAACTCATGCTCAATTGGAGCTTGGTTTCTATGCTAAAAGCTGTCCAAAAGCTGAGAATATTATTACAAACTTTGTTCATGACCATATCCACAATGCTCCATCACTTGCAGCTGCCTTACTTAGAATGCACTTCCATGATTGTTTTGTCAGGGGTTGTGATGGATCAGTGCTTCTAAACTCAACAAGTAACGAAGCTGAAAAGGATGCACCTCCAAATCTTACAGTTAGAGGCTTTGACTTCATTGATAGAATAAAGAGTCTTGTTGAAGCTGAATGCCCTAGTGTTGTGTCTTGTGCTGATATTATAGCTTTGGCTGCTAGAGACTCCATTGTTCACACAGGTGGCCCTTCTTGGAAAGTCCCAACTGGTAGAAGGGATGGGGTGATTTCTAACAAGACAGAAGCAACAAACAACATTCCTGCTCCATCTAGCAACTTCACCACCCTACAAACACTCTTTGCCAATCAGGGTCTTGATTTAAATGACTTGGTCCTTCTCTCAGGTGCTCACACAATTGGTATTTCTCTTTGCACATCATTCTCAAATCGCCTATACAATTTTACTGGTAAGGGTGATGAAGACCCATCACTAGACAGTGAATATGCAAAAAATCTAAAGACATTAAAGTGCAAGAACATAAATGATAATACTACAATAGTTGAGATGGACCCTGGGAGCCGCAACACATTTGATTTAGGCTATTATAGCCAGGTTGTTAAGAGAAGGGGTTTATTTGAATCAGATGCTGCATTGTTGACTAACTCTACTACAAAATCTCTAGTCAATCAATTTCTTCAAGGGTCAATTCAAAAGTTCTATGCTGAATTTGCTAAGTCTATTGAGAAAATGGGTCAAATTAATGTTAAGACTGGGACACAAGGTGAAATTAGGAAACATTGTGCATTTATAAATAGTTAA 978 0.3845 MGGQSYYKVLIICVVALFVSTHAQLELGFYAKSCPKAENIITNFVHDHIHNAPSLAAALLRMHFHDCFVRGCDGSVLLNSTSNEAEKDAPPNLTVRGFDFIDRIKSLVEAECPSVVSCADIIALAARDSIVHTGGPSWKVPTGRRDGVISNKTEATNNIPAPSSNFTTLQTLFANQGLDLNDLVLLSGAHTIGISLCTSFSNRLYNFTGKGDEDPSLDSEYAKNLKTLKCKNINDNTTIVEMDPGSRNTFDLGYYSQVVKRRGLFESDAALLTNSTTKSLVNQFLQGSIQKFYAEFAKSIEKMGQINVKTGTQGEIRKHCAFINS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1898 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Lan6g1898 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 Gene3D Peroxidase, domain 2 160 303 - -
Lan6g1898 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lan6g1898 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 Gene3D - 29 324 - -
Lan6g1898 325 PANTHER PEROXIDASE 3 324 - -
Lan6g1898 325 PANTHER PEROXIDASE 25-RELATED 3 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1898 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lan6g1898 325 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1898 Lan-Chr6 30025774 30028357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1898 14 325 Peroxidase AT1G05260 69.231 1.80e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1898 K00430 - gmx:547872 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1898 6 30025774 30028357 Lan10g0041 10 235965 237654 LSH
Lan6g1898 6 30025774 30028357 Lan7g0433 7 3095300 3097564 PCT
Lan7g0433 7 3095300 3097564 Lan6g1898 6 30025774 30028357 PCT