Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1893 ATGGTCCCTTCAACAGTTTGGGTTCGTGGGATTCAAGTGGAAACCCTTGCAATTACAGTGGTGTTTCATGTAATTTGGAAGGGATTTGATTTTTCCTTCAACAATTTGAGTGGGGTTGTCCCTTCGCGACTTTGTGATATTCCAAGGTTGTCATATGAAGATTGGGAGGCGGGTACCAAAGCATTGCTTGACAAAGAGTTTATTATAGGTGGTGGATCGATTGGCACAGTATACAGAACTGGTTTTGAAGGTGGTATCTCAATTGCATTGAAGAAGCTTGAAACTTTGGGAAGGATGAGAAACCAAGAAGAACTTGAGCATGAAATCGGGCGGCTGGGCTACATTCAACACCCTAATTTAGTTCATTTTCAAGGTTACTATTGGTCCTCTTCAATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGGGAATCTCTATGACAAACTACATGGAATTGGCTATCCAGGATCAAGCATTAGCAGAGGCAATAGGGAATTAAATTGGTCTAGAAGGTTCCAAATTGCATTTGGAACTGCAAGAGCCATTTCTGTTTTGTGGGACAGAAATGTTTTCGATATAATTAGAATGCAATTAGAAACACTTTCAATATAA 612 0.3987 MVPSTVWVRGIQVETLAITVVFHVIWKGFDFSFNNLSGVVPSRLCDIPRLSYEDWEAGTKALLDKEFIIGGGSIGTVYRTGFEGGISIALKKLETLGRMRNQEELEHEIGRLGYIQHPNLVHFQGYYWSSSMQLILSEFVPNGNLYDKLHGIGYPGSSISRGNRELNWSRRFQIAFGTARAISVLWDRNVFDIIRMQLETLSI* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1893 203 ProSiteProfiles Protein kinase domain profile. 63 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1893 203 PANTHER F16P17.10 PROTEIN 52 187 - -
Lan6g1893 203 Gene3D Transferase(Phosphotransferase) domain 1 45 199 - -
Lan6g1893 203 SUPERFAMILY Protein kinase-like (PK-like) 67 190 IPR011009 -
Lan6g1893 203 PANTHER OS05G0588300 PROTEIN 52 187 - -
Lan6g1893 203 Pfam Protein tyrosine and serine/threonine kinase 68 190 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1893 Lan-Chr6 29989740 29990597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1893 37 203 Receptor kinase-like Gene Family AT1G12460 63.743 2.46e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lan6g1893 PK_Tyr_Ser-Thr 4.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1893 - - lang:109350602 415.616