Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1877 ATGATGAGAATAATCCTCAACGACAAAAACAAAAACAATGAAGATGTGTCAAATGATAATGAAGGTTATTTGAAGAAGGGGCCATGGACACCGGATGAAGATGCAATATTAATAAATTATGTGAGCAAATATGGTGAAGGGAATTGGAATGCAGTTCAAAAGAATTCTGGGTTGTTAAGGTGTGGAAAAAGTTGTAGACTAAGATGGGTCAATCATCTAAGGCCTAATCTTAAGAAAGGTTCATTTTCTCTTGAAGAAGAACGAATCATTGTTGAACTTCATGCCAAGCATGGAAACAAATGGGCAAGAATGTCCTCAAAGTTACCTGGAAGAACCGACAACGAAATAAAGAACTTCTGGAACACTAGAATAAAAAGGTGTGAGAAAGCAGGTTTACCAATTTACCCTCCAGAAATTATACGTGAAGCCACTCTTTACCATCTTCAAGAGGAACGATATTTTGATAAACCTTACCATAATAATAATAATATCTCTTCAAGCCAAACACCATCTGACTCAGTTACTTCTGCTTCATCCTATGTTAGTGCTGTTGATGGTTCAATTGGAGCTTCAATCAAGGTTAATAATGAAAACTATGAGGTTGCACCAAATTCATCTAAAGGAAATAGTGGCTTATTGGATGCTTTAGTTGTGGAGGGTCAAAGTCATTCACATAACAACAAACCAAGGAGTGAAAATTCAGCAATAGCAGTAGCAGAAGCTGCAGAAAAATCATCTAATAATAAGAGGAAAAGCTTAGTGTTAGAGGAAAATACAAAGGAAGGAGGAACTAGTAGTGTGCATGTGGCTTTGGAGCCATCCTTGAAGAAAAAGAAGAAGAACAACAATGGAGACAATAGTAATGAAACCCTCAAGGGGAAGAAAGAAATTGCTAAGGAGCCATTGGATATAGATGAGACTGTGTGGGATGATGACTTGTGTAGTCTACTCACATATTTTCCCATAGAAATGCCAATACCAGATTGGTACCGTAAACAAGATCATAGTAAGTCACAAAACCTTCAAACTCAACCCACCAAAGAGATGGAGAAGCCAAAAAAATAA 1065 0.37 MMRIILNDKNKNNEDVSNDNEGYLKKGPWTPDEDAILINYVSKYGEGNWNAVQKNSGLLRCGKSCRLRWVNHLRPNLKKGSFSLEEERIIVELHAKHGNKWARMSSKLPGRTDNEIKNFWNTRIKRCEKAGLPIYPPEIIREATLYHLQEERYFDKPYHNNNNISSSQTPSDSVTSASSYVSAVDGSIGASIKVNNENYEVAPNSSKGNSGLLDALVVEGQSHSHNNKPRSENSAIAVAEAAEKSSNNKRKSLVLEENTKEGGTSSVHVALEPSLKKKKKNNNGDNSNETLKGKKEIAKEPLDIDETVWDDDLCSLLTYFPIEMPIPDWYRKQDHSKSQNLQTQPTKEMEKPKK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1877 354 MobiDBLite consensus disorder prediction 1 25 - -
Lan6g1877 354 CDD SANT 81 122 IPR001005 -
Lan6g1877 354 MobiDBLite consensus disorder prediction 330 354 - -
Lan6g1877 354 CDD SANT 28 73 IPR001005 -
Lan6g1877 354 Gene3D - 25 78 - -
Lan6g1877 354 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Lan6g1877 354 SMART sant 25 75 IPR001005 -
Lan6g1877 354 SMART sant 78 126 IPR001005 -
Lan6g1877 354 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Lan6g1877 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 73 IPR017930 -
Lan6g1877 354 MobiDBLite consensus disorder prediction 272 294 - -
Lan6g1877 354 Gene3D - 81 127 - -
Lan6g1877 354 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Lan6g1877 354 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 161 344 - -
Lan6g1877 354 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 13 172 - -
Lan6g1877 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Lan6g1877 354 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Lan6g1877 354 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Lan6g1877 354 MobiDBLite consensus disorder prediction 256 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1877 Lan-Chr6 29856794 29861133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1877 24 155 MYB Transcription Factor Family AT2G32460 72.727 1.31e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan6g1877 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1877 K09422 - zju:107417084 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1877 6 29856794 29861133 Lan3g0019 3 198941 202693 LSH