Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1873 ATGGCCACAGTAGTTGGACTCTCCATTGATTCAGATCCATTTTCTAGCACCAAATCCTTCATACACAACAAAACTAACCAACAACCCAAGTTGTTAAAACATAGTCCTAAGAACATCATTAACATGGATACCACAGATAGTAACAACACAAAGATACCATTCCAAGTCAACCTTATACACTGTCCTTCACCCTCTGATGATTATGATGATAACAACAACAATAATAAGAGACCCTTCATTGATGAAATGGACTTCTTCTCTGATCATAATAAGAACATTAGTAACAATCTTTTCTCTGCTTCTACCTCTGCACCACCACCTCCTCATATACATGATCATGATTCCACCACTACTCCTATCTTGGAATTTAAAGTAAACATTGGACTGAATCTTCTTACTACCAACATAAGCAGTGATCAATCCATGGTGGAAGATGATCTCTTATCAAATTCAGAAGAAAAAACAACTAAGAGTGAGCTTGTTGTTCTTCAAGCCGAGCTTAGGCAAATGAAGGTGGAGAATCTTCGGTTGAGGAGCTTGATTGATGAGGCTAAATCCAATTACCAAGACTTGCATATGCATTTGTTGAATTTGATGCAGGGAAAGAAGGGTGAGGACACAGAAGAGCACCACCATCAAGTGTTTGATGGAAAACTAAAAGACAAGAAACAAAGTGGGAATGTAGAGGCCTTTGTGCCAAGGCAGTTTATGGATCTCGGCTTGGCTACTAATGCTGCTGGTACTGATGAAACTACAGTTTCTTCATCGGTGGGAAGAAGTAAGGATCTGTCGAGTTCTCCTGTGAATAACGGAGAGGTGGCTGCCAAGGAATTAGGCAACAAAAATAATAGCAACGATAATGATGAAGGACTTGTAGTGTTTGATCAAGACAAGAAGGAAATTGGTAGAGGAATTGAGAGAGAGGATTGTCCACCAGATCAGGTTTTAGGTGCTAATAAGGTTCCAAGGTTTAGTCCTCCTTCAAATGAACAAGCTGAGGCCACCATGAGAAAGGCTAGAGTTTCGGTTAGAGCCCGATCAGAATCACCCATGATCACTGATGGGTGTCAATGGCGAAAGTATGGCCAGAAGATGGCCAAAGGAAACCCATGTCCTCGAGCATATTATCGGTGCACCATGGCTACTGGCTGCACTGTAAGAAAACAGGTACAAAGGTGTGCTGAAGACAGAACAGTACTTATCACAACATATGAAGGAAATCACAACCACCCTTTGCCTCCAGCAGCTATGGCAATGGCACAAACAACTTCCTCGGCTGCAAGAATGCTGCTTTCGGGATCGATGTCAAGTGCGGATGGCCTAATGAATGCAAACTTCCTCACAAGGACACTCCTTCCATGCTCTTCTAACATGGCAACTATCTCAGCATCAGCACCATTCCCTACTGTTACATTGGACTTAACTCAATCTCCAAAGCCTCAAACTCAATTCCATATTCCATTCCCATCAAGTCTCAATTCCTCAGCCTCATTATTGCCTCAGATACTTGGTCATGCACTCTATGACCAATCACAGTTTTCTGGTCTTCAAATGTCACAAGATTGCAATCAATCTCAACAACAATCACCACACATTGCTCACACAGTTGGTGCTGCCATTGCAGCTGATCCAAACTTCACTGCTGCTTTAGCTGCAGCTCTTACTTCAATCATTGGTGGTTCTCAACCAAACAACAACAACAACAACAACAACAACAACAACAACACTATTGCATCCAATAACAGCAATGGAAATATTACATCAAGCAACAAATAA 1776 0.4167 MATVVGLSIDSDPFSSTKSFIHNKTNQQPKLLKHSPKNIINMDTTDSNNTKIPFQVNLIHCPSPSDDYDDNNNNNKRPFIDEMDFFSDHNKNISNNLFSASTSAPPPPHIHDHDSTTTPILEFKVNIGLNLLTTNISSDQSMVEDDLLSNSEEKTTKSELVVLQAELRQMKVENLRLRSLIDEAKSNYQDLHMHLLNLMQGKKGEDTEEHHHQVFDGKLKDKKQSGNVEAFVPRQFMDLGLATNAAGTDETTVSSSVGRSKDLSSSPVNNGEVAAKELGNKNNSNDNDEGLVVFDQDKKEIGRGIEREDCPPDQVLGANKVPRFSPPSNEQAEATMRKARVSVRARSESPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCTVRKQVQRCAEDRTVLITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADGLMNANFLTRTLLPCSSNMATISASAPFPTVTLDLTQSPKPQTQFHIPFPSSLNSSASLLPQILGHALYDQSQFSGLQMSQDCNQSQQQSPHIAHTVGAAIAADPNFTAALAAALTSIIGGSQPNNNNNNNNNNNNTIASNNSNGNITSSNK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1873 591 ProSiteProfiles WRKY domain profile. 347 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1873 591 SUPERFAMILY WRKY DNA-binding domain 345 413 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1873 591 Pfam WRKY DNA -binding domain 354 411 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1873 591 PANTHER OS05G0567200 PROTEIN 53 584 - -
Lan6g1873 591 Gene3D WRKY domain 337 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1873 591 SMART WRKY_cls 352 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1873 591 MobiDBLite consensus disorder prediction 305 330 - -
Lan6g1873 591 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 53 584 IPR044810 GO:0003700
Lan6g1873 591 Coils Coil 167 187 - -
Lan6g1873 591 MobiDBLite consensus disorder prediction 561 591 - -
Lan6g1873 591 MobiDBLite consensus disorder prediction 248 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1873 Lan-Chr6 29823675 29826866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1873 74 572 WRKY Transcription Factor Family AT1G62300 46.768 3.23e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1873 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1873 - - lang:109357814 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1873 6 29823675 29826866 Lan10g0026 10 132199 134779 LSH
Lan6g1873 6 29823675 29826866 Lan7g0416 7 2925653 2928414 PCT
Lan6g1873 6 29823675 29826866 Lan13g0516 13 3889206 3892347 PCT
Lan7g0416 7 2925653 2928414 Lan6g1873 6 29823675 29826866 PCT
Lan13g0516 13 3889206 3892347 Lan6g1873 6 29823675 29826866 PCT