Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1869 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACTACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGAGCATAGTGACAGTTAGATGTGGGCATTGTGCTAATTTGCTATCAGTTAACATGCCACCATCTCTTCAAACATTTCCTCCTCAACACCCTCAGGCACAGAAACAACATTTAAGCTTTGAAGAACTAAGCAGCAAGGAAATGGGATCATCATCATCTTCAAAATGCAACAAATTTGCAGCATTTCAGCCTATAGATCACCAACATAGAATTCCTCCAATTCGTCCTCCTGAGAAGAAACAACGTGTTCCTTCTGCATATAATCGGTTCATCAAAGAAGAAATCCAAAGAATTAAGGCTAGTAATCCAGATATAAGCCACAGAGAAGCTTTTAGCACAGCAGCCAAAAACTGGGCTCATTTTCCTCACATTAACTATGGGTTAAAGCTTGATGCCAACAAGCAAACAAATCTGCCAGGTGAAGGAACTACCAAGTCGAATGGATTTTACTGA 543 0.4088 MDMMGTERVCYVHCNFCNTTLAVSVPCSSLLSIVTVRCGHCANLLSVNMPPSLQTFPPQHPQAQKQHLSFEELSSKEMGSSSSSKCNKFAAFQPIDHQHRIPPIRPPEKKQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHINYGLKLDANKQTNLPGEGTTKSNGFY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1869 180 PANTHER AXIAL REGULATOR YABBY 2-RELATED 1 180 - -
Lan6g1869 180 Gene3D High mobility group box domain 97 154 IPR036910 -
Lan6g1869 180 Pfam YABBY protein 6 158 IPR006780 GO:0007275
Lan6g1869 180 PANTHER PROTEIN YABBY 6-RELATED 1 180 IPR006780 GO:0007275
Lan6g1869 180 SUPERFAMILY HMG-box 103 152 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1869 Lan-Chr6 29797116 29802617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1869 4 180 C2C2-YABBY Transcription Factor Family AT1G08465 59.341 1.65e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan6g1869 YABBY 1.4e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1869 K25796 - gmx:100785458 270.396