Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1858 ATGTCTTCTATAGTTCTACCCCTTCATCATAAAACTGAATCACTACTCTCACCAAACACTTCCGAAAGAAGCTCCTATCCACAGCCCCACCTCTCTCTTCATTTCACATTGCTTTCACTTTCTTCCTCTTTTGTCTCTGCTTCCAACAACTTATATCTATGTACCTTAATTCTCATATATTTATCTATCTTTGAAAAACTAAAACCATATTGTTCTATTTCTTTGATTCCTATCCTAGGTTTAAATATCATTAGTATTATGTCTTCAAACAAGAGAAGGGTTATGAAAACCCTACTCACTCCAAATGGAAGTTGTGGCTGCGGCAAAACAAAGCCCTCACAAGTACATGAGCCCATTGCAAAACCTAAAATTTCCATTTACCAAAACACAAACCCTAGCAGACTCACTTCCTCATCTGCCACCACTTCCGGCGGCGGAGACCGTGATGAAGATATCACTTCCACCACTATCTCTGAAGCCGACACTACTCATCATGATCATAAGATTCATGACAAACCCATCAAGGATCAAAGTATGTCGAAACCATGCCCTAAACTAATTGGTAGCATTGCAATTGAGAAGGATTCGGATGATCCGTACAGTGATTTTAGGTATTCAATGCTTCAAATGATAGTTGAGAAAGAGATCTATTCAGAAAATGATCTTCAAGAGCTTCTTCAGTGCTTTCTTCAGCTGAATGCGCCGTGCCACCACCATGCCATCGTTCAAGTTTTCATTGAGATTTGTGAAGAGTATTTCCCTAAGAAGCTTGATGGTAGTGGTGGGGAATCATCTTGCAAGAACCGCATCATTAATGGAAATAGTCGGTGA 831 0.3983 MSSIVLPLHHKTESLLSPNTSERSSYPQPHLSLHFTLLSLSSSFVSASNNLYLCTLILIYLSIFEKLKPYCSISLIPILGLNIISIMSSNKRRVMKTLLTPNGSCGCGKTKPSQVHEPIAKPKISIYQNTNPSRLTSSSATTSGGGDRDEDITSTTISEADTTHHDHKIHDKPIKDQSMSKPCPKLIGSIAIEKDSDDPYSDFRYSMLQMIVEKEIYSENDLQELLQCFLQLNAPCHHHAIVQVFIEICEEYFPKKLDGSGGESSCKNRIINGNSR* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1858 276 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 87 262 IPR038933 GO:0045892
Lan6g1858 276 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 190 249 IPR006458 -
Lan6g1858 276 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 87 262 - -
Lan6g1858 276 MobiDBLite consensus disorder prediction 152 178 - -
Lan6g1858 276 MobiDBLite consensus disorder prediction 129 151 - -
Lan6g1858 276 ProSiteProfiles OVATE domain profile. 192 251 IPR006458 -
Lan6g1858 276 MobiDBLite consensus disorder prediction 129 182 - -
Lan6g1858 276 Pfam Transcriptional repressor, ovate 196 251 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1858 Lan-Chr6 29716030 29717587 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan6g1858 Ovate 3.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1858 - - lang:109350845 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1858 6 29716030 29717587 Lan7g0388 7 2638560 2639616 PCT
Lan7g0388 7 2638560 2639616 Lan6g1858 6 29716030 29717587 PCT