Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1855 ATGGAAGAAAAAAAGATGTTGATGATAGAAGGGGTTTCACGTGAAGCACAGATGTCACTTGCTGCATCATCTATGTTTCCTGGGTTTAGGTTCTGTCCCACTGATGAAGAATTGATTTCTTATTACCTTAGGAAGAAGTTGGATGGCCATGAAGATTCTGTTCAAGTTATTTCTGAGGTTGAGCTTTGTAACTTTGAGCCTTGGGATTTACCAGCGAAATCGTTCATTCAGTCAGATAATGAGTGGTTCTTCTTTTCACCACGTGGAAGAAAGTACCCAAATGGGACACAAAGTAAAAGAGCAACTGAATATGGGTATTGGAAGGCCACAGGAAAAGAACGCAATGTTAAGTCAGGTTCTAATGTTATAGGCACCAAGAGAACTTTAGTGTTCCATTTAGGACGTGCACCTAAAGGAGAGAGGACTGAATGGATTATGCATGAGTACTGCATTAGTGACAAGTCTCAGGAGTCTTTAGTAGTTTGTCGACTAAAGAGGAACACAGAGTTTCGATCAAGTGATGCTCAAAATAGAGCTTCTTCAAGCCAAATGCACATTGTAAATTCACATGAAAGTGATGGTGTTGATCAAAGGGATGGTGTGTGTCAAGAAGATAAAGAGGGTAGTAGTTATGGTTCTCTTTCAACAGAGCAAATTGATTCTGTGTCTGAATCCAATCAGAGACTAGCTAATGAAACTGCTTTGACTGAATCTTCCGGTCATGCAAAGGAGGTGAATGAAGAGGATTGTTATGCTGAAATACTAAAGGATGATATTATCAAATTAGATGAATCATCATTCTCAAAAGATATCATAAAATCAGAGGATTCTACTCCAATACAGGTGCTACATCCTACCCAAGGCACAGCACAAAGGAGAATAAGATTAAATGTTAGGAATCCAAGGAAATCTCATGCAGGAAAAGAACCTTTTTTACCACACACATCAAAGAATAATACCTTGTGTGGCAGAACCACCAACCGTTTCTTCATATTTGCTTTCATTATGATATCTATATTTTTTTGTCTATATTGGGTTGTCTCAAACAAGTGA 1053 0.3827 MEEKKMLMIEGVSREAQMSLAASSMFPGFRFCPTDEELISYYLRKKLDGHEDSVQVISEVELCNFEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGTQSKRATEYGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCISDKSQESLVVCRLKRNTEFRSSDAQNRASSSQMHIVNSHESDGVDQRDGVCQEDKEGSSYGSLSTEQIDSVSESNQRLANETALTESSGHAKEVNEEDCYAEILKDDIIKLDESSFSKDIIKSEDSTPIQVLHPTQGTAQRRIRLNVRNPRKSHAGKEPFLPHTSKNNTLCGRTTNRFFIFAFIMISIFFCLYWVVSNK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1855 350 Gene3D NAC domain 34 171 IPR036093 GO:0003677|GO:0006355
Lan6g1855 350 MobiDBLite consensus disorder prediction 172 242 - -
Lan6g1855 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 19 338 - -
Lan6g1855 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 338 - -
Lan6g1855 350 ProSiteProfiles NAC domain profile. 25 167 IPR003441 GO:0003677|GO:0006355
Lan6g1855 350 MobiDBLite consensus disorder prediction 173 190 - -
Lan6g1855 350 MobiDBLite consensus disorder prediction 208 240 - -
Lan6g1855 350 Pfam No apical meristem (NAM) protein 27 150 IPR003441 GO:0003677|GO:0006355
Lan6g1855 350 SUPERFAMILY NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Lan6g1855 350 MobiDBLite consensus disorder prediction 191 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1855 Lan-Chr6 29701990 29704692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1855 12 294 NAC Transcription Factor Family AT2G27300 52.632 2.13e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g1855 NAM 1.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1855 - - gsj:114373381 481.1