Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1838 ATGGTAGTTAATTCTGAGAATAAAGCTTTTGCTTATGACAACCTTTCCCAAGAATTTGCACCTTCATCATCAACCATGACTCTACAACAATCACAGCAAATGGTGTCATTGCAAGATATACCGGAATTTACATTTTCTTCACTCACCAAACAAAACTCAATACTCTCACTCACCCTTGATGAATTCCAATGCAAGAGTGGGAAGAGCTTTGGGTCAATGAGCATGGATGAGTTCCTAGCCAGCATTTGGAACTCTGATGATATTAACCAATTTTCACTACCTAATAACCATGATCAAGCTGGTAGTACTTCTCAGAGTAAAAGTGTTGTTGAGACAGAACAAGTCATCATTCCTCAGCAAGGCACATTCTTTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTATGGTGTGAAATCCAACAACCGCGACAGAACGAAGCTAATAACATTGGCAGGAACGAGAGGACACTCGAAAGGCAAAGAACACTTGGGGAGATGACTTTGGAGGATTTCCTAGTAAAAGCTGGTGTAGTACAAGAACCATCATCATTACCAAGAATTGCAATGTCATTTCAGAATCAAACTGGTAACAATGCAAGTAATAATAATATTATTAGACAATTTGGTGCAAGTTATGGATTTAGGCCTGAAATTGGGGTAGGATTCTGTACCCAACAAAATGTCGGAAGCCGTGATGAGCTTGCAACATACCAAATGTTGTCACAGAATAATAGCTCGGTAGTAAGAGGTCAAAATACAAGCAGTGCTATAGAGAAATGCCGAAGTATACCCGAGTCAAGTGGGAGTAATAGCAGGAAGAGGATAATTGATGGTCCTCCTGAACTGGCAGTGGAGCGAAGGCAGCGCAGAATGTTAAAGAATCGAGAATCAGCAGCACGATCTCGAGCAAGAAGACAGGCATATACTGTGGAGCTAGAAGCAGAACTGGGTATATTAAAACAAGAGAATGACAAGCTAAAAGAAATTCTGAGTGAAGCTGAGCGCAAGAGAAAACAGGAGATTTTCCACAGAAAGCAATCAACACAGGCTCAAAAGAGGACAGAAAAAATGAGGACAATAAGAAGGAGTGTAAGCACAGCCTGGTGA 1113 0.4097 MVVNSENKAFAYDNLSQEFAPSSSTMTLQQSQQMVSLQDIPEFTFSSLTKQNSILSLTLDEFQCKSGKSFGSMSMDEFLASIWNSDDINQFSLPNNHDQAGSTSQSKSVVETEQVIIPQQGTFFVPPPICKKTVDEVWCEIQQPRQNEANNIGRNERTLERQRTLGEMTLEDFLVKAGVVQEPSSLPRIAMSFQNQTGNNASNNNIIRQFGASYGFRPEIGVGFCTQQNVGSRDELATYQMLSQNNSSVVRGQNTSSAIEKCRSIPESSGSNSRKRIIDGPPELAVERRQRRMLKNRESAARSRARRQAYTVELEAELGILKQENDKLKEILSEAERKRKQEIFHRKQSTQAQKRTEKMRTIRRSVSTAW* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1838 370 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 286 338 IPR004827 GO:0003700|GO:0006355
Lan6g1838 370 PANTHER BZIP TRANSCRIPTION FACTOR 27 370 - -
Lan6g1838 370 MobiDBLite consensus disorder prediction 343 370 - -
Lan6g1838 370 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 370 IPR043452 GO:0003700|GO:0045893
Lan6g1838 370 Coils Coil 311 341 - -
Lan6g1838 370 Gene3D - 286 342 - -
Lan6g1838 370 MobiDBLite consensus disorder prediction 343 362 - -
Lan6g1838 370 SUPERFAMILY Leucine zipper domain 288 337 IPR046347 GO:0003700|GO:0006355
Lan6g1838 370 SMART brlzneu 284 351 IPR004827 GO:0003700|GO:0006355
Lan6g1838 370 Pfam bZIP transcription factor 288 339 IPR004827 GO:0003700|GO:0006355
Lan6g1838 370 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 291 306 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1838 Lan-Chr6 29625851 29628896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1838 48 370 bZIP Transcription Factor Family AT3G44460 46.364 2.43e-76 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan6g1838 bZIP_1 1.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1838 K14432 - gmx:100799576 365.155