Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1834 ATGGTTTCCAATACTAGCAGTGACGACGAAATCAACAACAGCAGGAACATCATATTCAACAAATATGAGATCGGAAAGGTTTTAGGGCAAGGTAACTTTGCAAAAGTTTATCACGGTAGAAACCTTGCGACAAATGAAAACGTGGCGATAAAAGTGATAAAGAAGGAGAGGCTGAAGAAAGAGAGCCTGGTGAAACAAATAAAACGAGAGGTATCAGTGATGCATCTGGTTCGTCACCCTCACATCGTGCAATTGAAAGAAGTCATGGCCACAAAAGCGAAGATCTTCATGGTTGTTGAATACGTCAAAGGAGGCGAACTATTCGCCAAGGTAACAAAGGGTAAAATGGATGAAGATGAAGCACGCAAGTATTTTCAACAATTGATCAGCGCCGTCGACTTCTGCCATAGCCGCGGCGTCACACACCGCGATCTCAAGCCTGAAAACTTGCTCCTTGATGAAAACCAAGATCTCAAGGTTTCTGACTTCGGCCTCTCCGCCCTGCCGGAGCAGCGCCGCTCCGACGGGATGCTCGTCACGCCATGTGGGACCCCTGCTTACGTGGCACCTGAGGTTTTGAAGAAGAAAGGGTATGATGGTTCTAAAGCTGATATATGGTCTTGTGGTGTTATACTCTATGCATTGCTTTCAGGATATCTTCCATTCCAAGGTGAAAATGTTTTAAGGATTTATAGAAAATCTTTCAAAGCTGATTATGCATTTCCTGAATGGATTTCACCTCAGGCTAAGGATCTTATATCCAAATTGCTTGTTGTTAATCCTGAGAAGAGGTATTCAATCGATGATATAACCAAACATCCATGGTTTCAAGTTGGGTTCATGAGACCCATTGCTTTTTCAATGAAGGAGAATGCTGTTCAAAACAACATTGATTTCAACTATGATAATGATGTAGAAGATGTTAACATAGGAGGCAAGCCAGCTCGTCCATTTTACAACGCATTTGAGATAATTTCGTCACTATCTCATGGTTTTGATCTTAGGAGCTTGTTTGAGACGAGGAAGAGATCACCGTCGATGTTTATTTCAAAGTTCTCAGCTTCAGCAGTGGTGGCAAAACTGGAGGGTGTGGCGAAGAAGCTCAATTTTAGGATAACGGGGAAGAAGGAATACACGGTGAGGATGCAAGGGGAGACGGAGGGGAGGAAGGGGAAGCTGGCGATGACGGTGGAGGTGTTTGAGTTGGCGCCGGAAGTGGCGGTGGTGGAGTTTACTAAGTCTGCCGGTGATACATTAGAATATATTAAGTTTTGTGAGGACCAAGTTAGGCCTTCGCTCAAAGACATTGTTTGGACATGGCAGGGTGATAGTAATTGCCAACAACAGTAG 1350 0.4407 MVSNTSSDDEINNSRNIIFNKYEIGKVLGQGNFAKVYHGRNLATNENVAIKVIKKERLKKESLVKQIKREVSVMHLVRHPHIVQLKEVMATKAKIFMVVEYVKGGELFAKVTKGKMDEDEARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENQDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVLRIYRKSFKADYAFPEWISPQAKDLISKLLVVNPEKRYSIDDITKHPWFQVGFMRPIAFSMKENAVQNNIDFNYDNDVEDVNIGGKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSASAVVAKLEGVAKKLNFRITGKKEYTVRMQGETEGRKGKLAMTVEVFELAPEVAVVEFTKSAGDTLEYIKFCEDQVRPSLKDIVWTWQGDSNCQQQ* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1834 449 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1834 449 PANTHER CBL-INTERACTING PROTEIN KINASE 16 13 448 - -
Lan6g1834 449 Gene3D Transferase(Phosphotransferase) domain 1 12 314 - -
Lan6g1834 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lan6g1834 449 ProSiteProfiles NAF domain profile. 314 339 IPR018451 GO:0007165
Lan6g1834 449 PANTHER - 13 448 - -
Lan6g1834 449 CDD CIPK_C 320 434 - -
Lan6g1834 449 Gene3D Kinase associated domain 1, KA1 315 439 - -
Lan6g1834 449 SUPERFAMILY Protein kinase-like (PK-like) 18 324 IPR011009 -
Lan6g1834 449 Pfam NAF domain 318 373 IPR004041 GO:0007165
Lan6g1834 449 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Lan6g1834 449 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1834 449 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1834 Lan-Chr6 29598840 29600609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1834 17 445 CBL-interacting serine-threonine protein kinases AT5G25110 60.698 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan6g1834 Pkinase 4.3e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1834 - - gmx:100804244 759.214