Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1833 ATGGACTTTTCATCATGGATTAACACTTCATTGGATCTCAACATTAACCCTCCAAGAGTTTATGAAGAAGTTATTAAAAAGGAGGTGGAAACCAATTTTTTCTCATTGGGTATGAGGATGTCTTCTACCAAAGAAGAGTGTTCTAGTAGTGCCTTGGTGGAGGAGCTGAAGAGGGTGAGTGCAGAAAACAAGAAGTTGACTGAAATGCTGACAGATATGTGTGATAGCTACAACACTTTGAGAAGCAACTTGGTAGATTATATGTCAAAGAATTCTGATAAGGATCACCTCAACTTATCTTGCAAGAAAAGAAAGCCTGAAAGCAGTAATCCAATTCTTGTTAATAATGGTAACTCTCAGAGCTGTTCAACCGATGAGGAATCATGCAAGAAACAAAGGGAAGAGACCATCAAGTCAAAAATTTCTAGAGTTTATGTTAAGACAGAAGGATCTGATACTAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGACAAAAAGTGACTAGGGATAACCCTTCTCCAAGAGCATACTTCAAATGTTCTTTTGCTCCAACCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAATCCATTCTAGTTGCAACTTATGAAGGAGAGCACAATCATCCTCACCCTTGTCAAATGGAGGCAACATCAGGCTCCAGCCGCTGCATGACCCTAAATTCGGCGTCCTGTAACTCTTCTGCACCAATGGACACACTTGAGCTCACAAAATCTAAGTCCAACAATGGGTCTAAGAATGTAAATCCCAAACTTGTTACGCCGAAAGAGCCGCAGACTTTGGTGGAACAGATGGCTAATTCCTTGACCAAGGATCCTAACTTTAGAGCAGCACTCATTGCTGCCATTTCAGGAAGAGCATTGCACAAGAATTAA 915 0.4077 MDFSSWINTSLDLNINPPRVYEEVIKKEVETNFFSLGMRMSSTKEECSSSALVEELKRVSAENKKLTEMLTDMCDSYNTLRSNLVDYMSKNSDKDHLNLSCKKRKPESSNPILVNNGNSQSCSTDEESCKKQREETIKSKISRVYVKTEGSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCPVKKKVQRSVEDQSILVATYEGEHNHPHPCQMEATSGSSRCMTLNSASCNSSAPMDTLELTKSKSNNGSKNVNPKLVTPKEPQTLVEQMANSLTKDPNFRAALIAAISGRALHKN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1833 304 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1833 304 Coils Coil 49 69 - -
Lan6g1833 304 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1833 304 PANTHER TRANSCRIPTION FACTOR 1 304 - -
Lan6g1833 304 Gene3D WRKY domain 141 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1833 304 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1833 304 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 304 IPR044810 GO:0003700
Lan6g1833 304 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1833 Lan-Chr6 29579029 29580758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1833 4 304 WRKY Transcription Factor Family AT1G80840 50.784 1.05e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1833 WRKY 2.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1833 - - gmx:100798375 420.624