Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1830 ATGTTACAACATGTGTGTCTGTTTTGCAGGAGCCTCAAAATGTTTGACTGTGGTGGTGCTTACAGGAAGGACAAGAATTTTACAAGGTTGGATGATCAGGAATCAAATGTGTCAATGTCATCTGGCACAAGTGGAATGATGAGATTAAGGTATACAGGCCGTGGGAAAAAAAGTTCATCGAAATCGTTTCGGGTTGGAGTGAAGAAAGGATCGGATGGACTAAGGAGGATATTTGGAATATCACTCAAAAGTGGAGTCGCCTGGTCAGTGTTCCCAGAAGATCTTAAAGTGTCACAGAGAAAAGTATTTGACCCTCAAGATAAGAATCTTCTGTATTGGAATAAGTTTTTACAGATTATGTGTATTCTTTCTATATCTTGTGATCCTCTATTCTTTTATCTTCCTTATTTCAATCACAAATCATTTTGCCTCGCCATAGATAGTTCCCTAGCAAATTCTGTGATTACCATGAGAACAATTTTCGATTGTTTTTATCTCCTTCGCATAAGTTTTCAGTTCCGCACAGCTTTCATTGCGCCTTCCTCTCGTGTATTTGGGCGAGGCGAACTTGTGATTGATCCTGCAGAGATTGCCAAGAGATATTTACAACGTTACTTCATGATTGACTTCATTTCTGTGTTACCTCTCCCACAGATTATTGTGTGGAAATATCTTCGCAGAACAAGACATACAGAAGTATTGGCCACAAAAACGGCATTGTTGAGAATTGTGATCCTCCAATATTTTCCAAGATTTGCACGCTTTATACCTTTAGCTTCAGAGGTTAACAAGACAGCAGGTGTTTTTTCTGAAAATGCACTGGTCGGTGCCGCATACTATTTGATCTGGTATATGCTTGGTAGTCATATAACGGGGTCGGTGTGGTACTTACTTGCTATAGAACGTAACGACAGATGCTGGAGGGATGCTTGTAAGGGAGTTGAAATATGTCAGACACAATTCTTGTACTGTGGGAGTTCAAATAAGCGTGTTCCTAACTATGATGACTGGAGAAATATCAGCATGAGTGTCCTTAAGACTCACTGTTTCATTGAGAATGATAACTTGCCATTTAAATATGGAATCTACAGTCAAGCCATAGAATCTAATATTGTTGCATCCATTGATTTCTTTCCTAAACTTTGTTACTGTTTGTGGTGGGGGCTCCAAAACTTAAGTACAGTTGGTCAGGGGCTTCAAACCAGTACCTACCCTGGAGAAGTTCTGTTTTCCATTGTAATAGCTATTTTGGGGCTTGTCCTTTTCGCTCTACTCATCGGAAAGATGCAGACCTACCTTCAATCAATGTCGGTTCGTCTAGAGGAAATGAGGATCCAAAGACGTGACTCTGAGCAGTGGATGCATCATCGGTTGCTTCCTGCTGAGCTAAGGGAAAGAGTTAGAAGGTATGAACAATACAAATGGCTGAACACTAGAGGAGTAGATGAAGATAACTTGGTTAGGAGTCTTCCAAAAGATCTTAGGAGGGATATCAAACGCCACCTTTGTTTGAATTTGGTCAGAAGGGTGAGTAACCAAGTTACCCTTTTCATTCATTCATTGTTGACATGTGTATGCATGCTATTTTCAATCCAACACTTTCTTTTCTCAATTTTCATTGATCAGGTTCCTCTGTTTGCTAACATGGATGAACGGTTGCTTGATGCAATATGTGAGCGATTGAAGCCTTGCTTATTCACTGAGAAGACATTCGTAGTTCGGGAAGGGGATCCAGTTAATGAGATGCTCTTCATCATTCGCGGCCGTCTAGAGAGTATCACAACAGATGGTGGAAGAAGTGGATTTTTCAACAGGGGATTTCTGAAAGAAGGTGACTTTTGTGGAGATGAGCTACTAACATGGGCACTGGACCCGAATTCGGCAGGTAACTTGCCATCATCTACAAGGACAGTGAAGGCCTTAAATTTGGTTGAAGCATTCGCTTTGGAAGCAGAGGAGTTGAAGTTTGTTGCTTCTCAGTTTCGGCACCTTCATAGCAGGCAGGTTCAGCATACATTCCGTTTCTATTCACAGCAATGGAGAACATGGGCTTCTATGTTCATACAAGCTGCATGGAGGCGTTATTCAAGGAGGAAGATAATCGACAAGCGCAGAAAGGAGGAAGCAGAAGAGTTATATGAATCTGATTATGAAGAAGATAATGATGATGTTTCAAGAGCCTTGGTTCCACGTATTGATACTACTACTACTACTACTACTTCTTCTTCAGCTAGGCCTGGATTTGATAGCACTATATATGCTACCCTCTTTGCTGCTAATGCCCTTAGAAGCCATAGGCTTCACACTTCAACTTCCAGGGGACTGCAGAAACTTCCAAAGCCTCCAGAACCTGACTTTAGTCATCTTGATGAATGA 2376 0.412 MLQHVCLFCRSLKMFDCGGAYRKDKNFTRLDDQESNVSMSSGTSGMMRLRYTGRGKKSSSKSFRVGVKKGSDGLRRIFGISLKSGVAWSVFPEDLKVSQRKVFDPQDKNLLYWNKFLQIMCILSISCDPLFFYLPYFNHKSFCLAIDSSLANSVITMRTIFDCFYLLRISFQFRTAFIAPSSRVFGRGELVIDPAEIAKRYLQRYFMIDFISVLPLPQIIVWKYLRRTRHTEVLATKTALLRIVILQYFPRFARFIPLASEVNKTAGVFSENALVGAAYYLIWYMLGSHITGSVWYLLAIERNDRCWRDACKGVEICQTQFLYCGSSNKRVPNYDDWRNISMSVLKTHCFIENDNLPFKYGIYSQAIESNIVASIDFFPKLCYCLWWGLQNLSTVGQGLQTSTYPGEVLFSIVIAILGLVLFALLIGKMQTYLQSMSVRLEEMRIQRRDSEQWMHHRLLPAELRERVRRYEQYKWLNTRGVDEDNLVRSLPKDLRRDIKRHLCLNLVRRVSNQVTLFIHSLLTCVCMLFSIQHFLFSIFIDQVPLFANMDERLLDAICERLKPCLFTEKTFVVREGDPVNEMLFIIRGRLESITTDGGRSGFFNRGFLKEGDFCGDELLTWALDPNSAGNLPSSTRTVKALNLVEAFALEAEELKFVASQFRHLHSRQVQHTFRFYSQQWRTWASMFIQAAWRRYSRRKIIDKRRKEEAEELYESDYEEDNDDVSRALVPRIDTTTTTTTSSSARPGFDSTIYATLFAANALRSHRLHTSTSRGLQKLPKPPEPDFSHLDE* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1830 791 Gene3D - 116 437 - -
Lan6g1830 791 SUPERFAMILY cAMP-binding domain-like 442 511 IPR018490 -
Lan6g1830 791 ProSiteProfiles cAMP/cGMP binding motif profile. 545 628 IPR000595 -
Lan6g1830 791 SMART cnmp_10 545 676 IPR000595 -
Lan6g1830 791 Pfam Ion transport protein 112 439 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan6g1830 791 Gene3D Jelly Rolls 543 663 IPR014710 -
Lan6g1830 791 ProSiteProfiles IQ motif profile. 681 710 IPR000048 GO:0005515
Lan6g1830 791 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 38 514 - -
Lan6g1830 791 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 533 788 - -
Lan6g1830 791 SUPERFAMILY cAMP-binding domain-like 539 663 IPR018490 -
Lan6g1830 791 CDD CAP_ED 545 676 IPR000595 -
Lan6g1830 791 Gene3D Helix hairpin bin 439 503 - -
Lan6g1830 791 MobiDBLite consensus disorder prediction 768 791 - -
Lan6g1830 791 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 533 788 - -
Lan6g1830 791 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 38 514 - -
Lan6g1830 791 SUPERFAMILY Voltage-gated potassium channels 105 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1830 Lan-Chr6 29562401 29567305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1830 25 786 Ion Channels AT1G15990 63.415 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1830 K05391 - gmx:100810453 1085.09