Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1828 ATGCCTTCAAGACCCTTCTCTTTTAGTCCAAAACCTTCAACTCCAAGTTTTTTCACTAAAACAAGTGTCTTGTTCCTTGCACTCACCATTTCAGCTTCTGTTGTGATCTTCTGCTCAATCCTTTACTTCCTTTACCATATTTGGAACTCTCTTGTACATAGAGCTAAGACTATTCCCTTTGATGCTAGTGCTCCCTTGAAGCTTCAAAGATTCTCATACAAAGACTTAAAGCAAGCCACCAATGGCTTTGACACTGCCAATGTCATTGGTAAAGGTGGTTCTGGCACTGTTTTTAGAGGAATACTTAAAGATGGGAAATTGATTGCCATCAAGAGACTAGACTCTTTGTCTTTGCAGTCAGAAAGAGAGTTTCAGAATGAGCTTCAAACTCTTGGAGGGTTAAGATCACCATTCTTGGTCACCCTTTTGGGCTATTCTGTTGAAAAAACCAAGAGAGTGTTGGTGTATGAATATATGCCTAACAGAAGCTTGCAAGAGTCACTATTTGGAGAAGGGTGTGTGAGTTTGAGTTGGGAGAGGAGGTTTTGCATTATATTGGATATTGCTAGAGCATTGGAGTTCTTGCACCTTGGATGTGATCCACCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTTCTTGATGCTGAGTGCCGTGGGAAGATCTCCGATTTCGGGTTGTCAAGGATTAAAGTGGAGGGTGAATTTGGAATGGACTTGTTCAGCCAGGACTTAGGCAAGAGCCAAGACCTTTCAGGTAATTTAACTGCAGAAACTCAAACCCCTCCAGTTATTGGTACTCCTGTTGAGAGTGTTAATGAAGTGGATTTTGCTCTAGCTTTGCAAGCTTCTTCTTCATCCAAGAATAGCAGAACTTGTTTTAATGTTAGAGCATTGAACTTGAATTCTATGAATTATAATGCCAATATTATTGCCAGTGAGAGTGAAATCAGGAGTGTGAATAGTAATGCAAAGGGTAAGGAAATTTCAACTTCAGATATAGGAGGGGATGATTGTTGGAACAGCAAGTTTGTTCCATATGACGATGAGTTTTCGAGCATTGATTACAGTAAGGAGCTAAGTCCTAACGCTTCTTTGGTGGATGATGAGAAGGAAAATGGAAAACAATGGGGAAAAGATTGGTGGTGGAGACAAGATGGAAGTGGTGAATTATGTAGTAAAGACTATGTTAAGGAGTGGATAGGGAGTCAGATTTGTGCATCAAAGCCTAGCTGGGATGATGGCAAGAACAATATTCATGAGAAAGTAGTAGAGTTGGAGAACTCAGATCCAACAATAGATAAAGCCAATGATGCAATAGGAAATGCAAATAATGTGGTTTTCAAGAAAGAGTTGAAGGGAAAGAAGAATCAAAAGAAGAAGCAGAGGAAGATGCGAGAGTGGTGGAAAGAAGAGCATGTTGCAGAACTAAGTAAGAAGGGAAGAAAACTAAAAAGTTTTCAAAGTAAGTGGAAGAAAGGTTTGAAAGTGCCTCATTTTGATTTAGGTAGAAGGTTCTACATTTCCAAGAGGAAGAAGAACTTTGGAGTCGAGAAGGATGATGAGAATGAGTGTGATCAAAATGGTGGTGAGTTTAGCTTCAGAAGAGGTTGGAGGAAGAAGAAAAGTACTCATTCGGTTGGAAGCGACATGGATCTTTTCAGCCACGAGCTGAGCAGCACAACTAGCATGAGAGGGACATTGTGTTATGTAGCACCAGAATATGGAGGGTGTGGATTCTTAATGGAGAAGGCTGATATATACAGTTTTGGAGTATTGATTCTTGTGATTGTGTCTGGTAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGCTAGAGAAAGCTAATTTAATAAGCTGGTCTAGGCACTTGGCTCATGTTGGTAACATTTTAGAACTAGTAGATGAGAGATTCAAAGAAGATTATAACAAGGAACAAGCAACCATGTGCATCAACTTGGCACTCACTTGCTTACAGAAAATCCCAGAATTCAGGCCAGATATTGGAGCTATTGTTAAAATTTTGAAGGGTGAGATGGACCTTCCACCATTTCCATTTCAGTTCTCACCTTCTCCTCCACCTTCCAAATTATACAGTGGATCAAGGAGAAAACAAAAGGGCAGTGTAGAATAA 2139 0.4011 MPSRPFSFSPKPSTPSFFTKTSVLFLALTISASVVIFCSILYFLYHIWNSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDSLSLQSEREFQNELQTLGGLRSPFLVTLLGYSVEKTKRVLVYEYMPNRSLQESLFGEGCVSLSWERRFCIILDIARALEFLHLGCDPPVIHGDIKPSNVLLDAECRGKISDFGLSRIKVEGEFGMDLFSQDLGKSQDLSGNLTAETQTPPVIGTPVESVNEVDFALALQASSSSKNSRTCFNVRALNLNSMNYNANIIASESEIRSVNSNAKGKEISTSDIGGDDCWNSKFVPYDDEFSSIDYSKELSPNASLVDDEKENGKQWGKDWWWRQDGSGELCSKDYVKEWIGSQICASKPSWDDGKNNIHEKVVELENSDPTIDKANDAIGNANNVVFKKELKGKKNQKKKQRKMREWWKEEHVAELSKKGRKLKSFQSKWKKGLKVPHFDLGRRFYISKRKKNFGVEKDDENECDQNGGEFSFRRGWRKKKSTHSVGSDMDLFSHELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWSRHLAHVGNILELVDERFKEDYNKEQATMCINLALTCLQKIPEFRPDIGAIVKILKGEMDLPPFPFQFSPSPPPSKLYSGSRRKQKGSVE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1828 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Lan6g1828 712 MobiDBLite consensus disorder prediction 695 712 - -
Lan6g1828 712 Gene3D Transferase(Phosphotransferase) domain 1 159 269 - -
Lan6g1828 712 Gene3D Transferase(Phosphotransferase) domain 1 531 683 - -
Lan6g1828 712 ProSiteProfiles Protein kinase domain profile. 83 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1828 712 Pfam Protein kinase domain 85 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1828 712 SUPERFAMILY Protein kinase-like (PK-like) 63 698 IPR011009 -
Lan6g1828 712 Gene3D Phosphorylase Kinase; domain 1 50 158 - -
Lan6g1828 712 MobiDBLite consensus disorder prediction 689 712 - -
Lan6g1828 712 SMART serkin_6 83 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1828 712 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Lan6g1828 712 PANTHER OS07G0586332 PROTEIN 1 709 IPR044576 -
Lan6g1828 712 PANTHER OS08G0275200 PROTEIN 1 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1828 Lan-Chr6 29551651 29554179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1828 562 677 Receptor kinase-like Gene Family AT3G58690 29.915 2.40e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lan6g1828 Pkinase 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1828 - - ccaj:109812677 1107.05