Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1827 ATGAGAATGTGGAAGGCATCAAGTATGTGTGTGTTGGTGATGTTAATGTTAATGGTATATGGAGTTGGTGGAACAGACCACATAGTAGGTGCTAATCGTGGGTGGAATCCTGGTATTAATTACACTCTTTGGTCCAACAATCACACTTTCTATGTCGGCGACCTTATCTCATTTAGGTACCAGAAGAACCAATATAATGTGTTTGAGGTGAACCAAACTGGATATGACAACTGCACCACAGAAGGGGCTTTTGGGAATTGGAGTAAAGGCAAGGACTTCATACCCTTGAATATGGCCAAAAGGTATTACTTCATTTGTGGCTATGGCCAATGCTTCAATGGTATGAAGGTTTCTGTCCTTGTTCATCCTCTCCCTTCTCCTCCTTCTCAATCTCAATCTTCTGCTAACCATTCTTCTCATAACTCTGCTGCTCCACTCACCTTCCAATCACACCTTCACTCTCTAATACTCTCTTCTGCTCTATTCTGCTTTGCTTGGAATTGGATCTAG 510 0.4216 MRMWKASSMCVLVMLMLMVYGVGGTDHIVGANRGWNPGINYTLWSNNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAFGNWSKGKDFIPLNMAKRYYFICGYGQCFNGMKVSVLVHPLPSPPSQSQSSANHSSHNSAAPLTFQSHLHSLILSSALFCFAWNWI* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1827 169 Gene3D - 25 137 IPR008972 -
Lan6g1827 169 ProSiteProfiles Phytocyanin domain profile. 25 123 IPR003245 GO:0009055
Lan6g1827 169 PANTHER BLUE COPPER PROTEIN 9 156 IPR039391 GO:0009055
Lan6g1827 169 PANTHER OS09G0557900 PROTEIN 9 156 - -
Lan6g1827 169 Pfam Plastocyanin-like domain 35 115 IPR003245 GO:0009055
Lan6g1827 169 SUPERFAMILY Cupredoxins 24 122 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1827 Lan-Chr6 29549445 29550287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1827 8 168 Phytocyanin Superfamily AT5G15350 37.195 8.22e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1827 - - pvu:PHAVU_010G162400g 211.46