Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1817 ATGGGGTTCGATGGAGAAAATATTGGGAGAATTCTTGCTCGTTGCCCTGAGATTTTTGCCACTAGCATTGATAAAACTCTGCAGAGGAAAATTGAGTTCCTTTGTGGGATTGGTGTTTCTGAAACTTACCTTGCTAGGGTTATTAGGAAGTATCCAGAGTTACTCGTTTATGACACTGATAACACTTTACCACATCGGATTATGTACCTTATGAAGTTAGGGCTTTCAGAGAAAGACATTGCATTTATGGTACGCACATTTTCTCCTCTCCTCGGGTACAGTATAGAAGAGGTTCTGAGGCCAAAAATAGAATTCCTAGTTAACTCAATGGGGAGGCCAGTAAGAGATGTGGTGGGGTACCCTAGGTATTTTAGCTATTCATTAGAAAAGAAGATAAAGCCAAGGTATTGGGTGCTCAAAGAAAGAAATATTAAGTGCAGCTTAAAGGATATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATTTATGTGTCATCTGGCTTCTCATGATGGGTTGTAA 522 0.3966 MGFDGENIGRILARCPEIFATSIDKTLQRKIEFLCGIGVSETYLARVIRKYPELLVYDTDNTLPHRIMYLMKLGLSEKDIAFMVRTFSPLLGYSIEEVLRPKIEFLVNSMGRPVRDVVGYPRYFSYSLEKKIKPRYWVLKERNIKCSLKDMLGKNDEEFAAEFMCHLASHDGL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1817 173 PANTHER CGI-12 PROTEIN-RELATED 2 164 IPR003690 GO:0003690|GO:0006355
Lan6g1817 173 Gene3D Transcription termination factor 3, mitochondrial 1 169 IPR038538 -
Lan6g1817 173 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Lan6g1817 173 SMART mt_12 9 40 IPR003690 GO:0003690|GO:0006355
Lan6g1817 173 SMART mt_12 45 76 IPR003690 GO:0003690|GO:0006355
Lan6g1817 173 SMART mt_12 81 113 IPR003690 GO:0003690|GO:0006355
Lan6g1817 173 Pfam mTERF 1 160 IPR003690 GO:0003690|GO:0006355
Lan6g1817 173 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 2 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1817 Lan-Chr6 29486977 29488179 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan6g1817 mTERF 7e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1817 K15032 - lang:109350776 352.829