Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1814 ATGTGGCTTCATAATAATAATAATAATAATCCAGAGGGAATAAGAAAGGGAGGAAAAGGTCATGGATTGGTTGCAGTGGCTGTAGATAAAGATAAGGGAAGCCATTATGCTCTTAAATGGGCTGCTGATAGTCTTCTTTCAAGAGGCCAAACTATTATTCTGATTCACGTTTTGCATAACACCACTTCTTCATCTTCAACAGGTAGCAGTAGCAACGCCTTGGGTTGTAATATCAGCAATTCTGTTGCATCTCCCTATAGACACCAACTCGATAACTCTACCAAGGACCTCTTTCTTACCTTCCATTGCTATTGTACACGCAAAGATATACAATGCCTTGATGTCCTACTTGAAGACACTGATGTTGTGAAAGCAATAACAGAATATGTCTCTTATGGCGCTATTGAGAACTTGGTGGTTGGTGCATCATCCAGGCATGGATTCATTAGATTCAAGTCATCAAATACAGCTAGTAGCATAACAAAGGGGACACCAGATTTTTGTACTGTATATGTTATCTCAAAGGGGAAAATCTCCACAGTTAGGAGTGCTTCTCGTCCAGCCCCACATGCCTCCCCACTGCTGAAGCATATACAGAATCTAAATAAAGACAATGAAGGAAATCAACCTCAGATCATACCCTCTAGACGTTCCAATTTGAGAGAGAGAGACAGGATATCAATCAAACCTCACAGCTGGCAGGATGAACCACTTCAACCAGCATTTGAAAGAAGAGGAGACATTAGTGCATTGTCTGAGGTGGATTTCGGAGAATCAGATACAGACATATCATTTGTAAGCTCTGACAGGCCAAGCAGTGGAAGAACATCATCTGTTTATGACTTCATTGACTCTGCTCGAACTTCACGAGCTTCTACTAGTTCTGATCGTAGCTTTGGATCTTCCCGTTTGGGACTTAAGTTCAATGACCCAATGTCATCGGATAGCACTGCTACGTCATTTTCAAATTCATCTCAGAACATGGATGAAGCAGTAGAAGCTGATATGAGAAGGTTGAAGCTCGAATTAAAGCAAACCATGGAAATGTACAGTACGGCATGCAGGGAAGCACTCACTGCGCAACACAAGCTAATGGAACTGAACCACTGGAGAATGGAGGAAGAAATAAGGATAGAAGAGACACAATTGGCACAGGAAGCTGCGCTGGTAATGGCGGAGAAGGAGAAAGCAAGAAGTAAGGCAGCGTTGGAAACGACAGAAGCGCTTAAGCAAATTGCTGAGGTTGAATCACATAGAAGAGAAAGTATTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAATTGAGAAAGCTATTGGACAATGTAACCCAAAGTGATGTGAAGTATAGGAAATACACAATTGAGGAGATTGAAGAAGCAACCAACTTATTTTCTGAATCTCAGAAAATTGGTGAAGGAGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACTCCAGTCGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGAAAATCACAGTTTCAGCAAGAGATTAACATACTGAGCTGCATACGTCATCCCAATATGGTGCTTCTTCTAGGAGCATGTCCAGAGTATGGCATACTGGTTTATGAATATATGGCTAATGGAAGCTTGGACGATTGTCTGTTTCGAAAAAAGAAGAATGGTGTTTTACCTTGGCAAGTGAGGGTTCGAATTGCTGCAGAGATAGGGACAGGACTACTCTTCCTCCATGAGACAAAACCTGAAGCATTAGTGCACCGTGATCTGAAACCAGGGAACATTTTGCTAGACCAGAACTACGTAAGTAAGATCAGCGATGTTGGATTGGCAAGGCTAGTCCCTGCTGTGGCTGAAAATGTAACACAATTGTGCATGACATCAGCAGCTGGAACTTTCTGTTACATTGATCCAGAGTATCAACAAACAGGAATGCTTGGAGTGAAATCTGATGTGTATTCTCTTGGGATCATTTTTCTACAATTGCTGACAGGAAGACCTCCAATGGGATTGGCTCACCATGTTCAACAGTCTATTGAGAAGGGAACATTTGCTGAAATGTTAGACCCATCTGTCACTGAATGGCCTTTTGAACAAGCATTGTGCCATGCAAAGATGGCACTCAAATGTGCTGAACTCAGGCGAAAAGATCGGCCAGACCTTTGCAAACAAATATTGCCTCACCTCAATAAATTCAGAGACTTTGCTGAACAAAGGTTTTTAGGAGGACCACTTAGTTGTATTATTAGTAGTACTGCTACTGCATCTTCCCCCAACAACACTCAACCTTCCATACAACAGGTTTGA 2295 0.4196 MWLHNNNNNNPEGIRKGGKGHGLVAVAVDKDKGSHYALKWAADSLLSRGQTIILIHVLHNTTSSSSTGSSSNALGCNISNSVASPYRHQLDNSTKDLFLTFHCYCTRKDIQCLDVLLEDTDVVKAITEYVSYGAIENLVVGASSRHGFIRFKSSNTASSITKGTPDFCTVYVISKGKISTVRSASRPAPHASPLLKHIQNLNKDNEGNQPQIIPSRRSNLRERDRISIKPHSWQDEPLQPAFERRGDISALSEVDFGESDTDISFVSSDRPSSGRTSSVYDFIDSARTSRASTSSDRSFGSSRLGLKFNDPMSSDSTATSFSNSSQNMDEAVEADMRRLKLELKQTMEMYSTACREALTAQHKLMELNHWRMEEEIRIEETQLAQEAALVMAEKEKARSKAALETTEALKQIAEVESHRRESIEVKALKEAEELRKLLDNVTQSDVKYRKYTIEEIEEATNLFSESQKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEINILSCIRHPNMVLLLGACPEYGILVYEYMANGSLDDCLFRKKKNGVLPWQVRVRIAAEIGTGLLFLHETKPEALVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQLCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHHVQQSIEKGTFAEMLDPSVTEWPFEQALCHAKMALKCAELRRKDRPDLCKQILPHLNKFRDFAEQRFLGGPLSCIISSTATASSPNNTQPSIQQV* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1814 764 Gene3D HUPs 24 175 IPR014729 -
Lan6g1814 764 MobiDBLite consensus disorder prediction 291 328 - -
Lan6g1814 764 Pfam Protein kinase domain 464 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1814 764 ProSiteProfiles Protein kinase domain profile. 463 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1814 764 Gene3D Transferase(Phosphotransferase) domain 1 536 736 - -
Lan6g1814 764 MobiDBLite consensus disorder prediction 201 216 - -
Lan6g1814 764 SUPERFAMILY Protein kinase-like (PK-like) 445 725 IPR011009 -
Lan6g1814 764 PANTHER BNAA05G18880D PROTEIN 19 762 - -
Lan6g1814 764 SMART serkin_6 463 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1814 764 CDD STK_N 23 176 - -
Lan6g1814 764 PANTHER OS02G0152300 PROTEIN 19 762 - -
Lan6g1814 764 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 173 - -
Lan6g1814 764 Gene3D Phosphorylase Kinase; domain 1 441 535 - -
Lan6g1814 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Lan6g1814 764 MobiDBLite consensus disorder prediction 201 240 - -
Lan6g1814 764 Pfam Universal stress protein family 24 162 IPR006016 -
Lan6g1814 764 MobiDBLite consensus disorder prediction 217 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1814 Lan-Chr6 29477077 29480165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1814 1 763 Receptor kinase-like Gene Family AT1G78940 55.954 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan6g1814 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1814 - - gmx:100801601 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1814 6 29477077 29480165 Lan9g0562 9 8321867 8326763 PCT
Lan6g1814 6 29477077 29480165 Lan2g0552 2 7918138 7922926 PCT
Lan9g0562 9 8321867 8326763 Lan6g1814 6 29477077 29480165 PCT
Lan2g0552 2 7918138 7922926 Lan6g1814 6 29477077 29480165 PCT