Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1813 ATGCCAATGGGCGCGCGCTCTGCTATGCTTGTGCGCGCACCACCAACATCTATTTATTCTCACCATAATGTCTACTTTTTTGTTTTGGTATTATTGCTGTCAATACCATGTTCTTGTGAATATGTCTCTGATAGAGAGGCACTATTGAAGTTCAAGAATTCATTGAAGAATGTGGTATCCCTGAGCAGTTGGGATCCAACAATAAACTCAAAGCCACCTTGCTCTGGCAACGTCCCTAACTGGGTTGGATTGTTATGTATGAATGACAGAGTTTGGGGGTTACGGCTTGAGAACATGGGTCTAACAGGGAACATCGATGTGGAGTCATTGGGGTCAATGCCAGCCTTGAGGACACTTAGCCTAATGAACAATACCTTTGTGGGCTCATTGCCTAACATTAAGATGCTCACTAACTTGAAGGCACTCTTTTTGTCATATAATCATTTCTCAGGAGAGATACCTAATGATGCATTTTCCACTTTGCAAAAATTGAGAAAAGTTTATCTGTCAAATAATGAGTTCACCGGTAAAATCCCATCCTCCCTTGCTACTTTGCCTAATCTCCTCATCCTTGCCCTCAATTCAAACAAGTTTCAAGGTCAAATCCCTGATTTTCCACAAAAAAAATTGAGGACTCTCAACCTCTCTAATAATGATTTTGAGGGTTCCATCCCCACCAATCTGACCTCTTTCGACGCCTCATCCTTTACAGGCAACTCACGTCTATGTGGAGCGCCTCTAAAGAATCCTTGCAAAGGTGAAGCCCCAACATCAGAGAGTTCAGCAGCTGGAAATATGCGCATTGTGAAAATTTTACTTATAATTGTAATAATTGTAGGATTGATAGTAGCCCTGCTGGTTATAGTGTTGGTTATATGGCCTCGTTTAAGCTCCAATAATTATTCTAATAACCCATCTGAGGAATCATCATTCCAAGCAGGGGTGCAGCCCTCTAACAAGTATGATAATAATCATCCTCCCGTTTATGTGAAAACCAAGAGCCTAGCAGAACACCATCATGATGATCATCATAGACATGGTCATGGTCATGGTCATGGTCATGGTCACGGTCATACGAAGAGGGGGGAACAAGGTGGGAAGTTGACATTCCTAAGGCATGAAGGGCAAATGTTTGATCTACAAGATTTGCTAAGAGCCTCAGCAGAGATTCTAGGGAGTGCTGGATTTGGGTCATCATACAAGGCAGTGATTATGGATGGACAAGCAGTGGTTGTGAAGAGGTACAAACAAATGAACAATGTAGGAAGAGAGGAATTCCATGAGCACATGAGAAGGCTAGGAAACCTGAATCATCAAAATATTCTACCTCTCCTTGCTTATTATTATAGGAAAGAAGAGAAGCTGTTGATTTCTTCGTATGTTCACAACGGTTGTTTGGCTACCCATCTTCATGGCAATCATAACTATCAAAAGCCTGGACTTGATTGGCCAACCCGGTTGAAAATAGTGAAAGGTATAGCTCGAGGTTTGGATTACCTATACAATGCACTCCCAAGCTTAATTGTGCCTCATGGTCATCTTAAATCTTCCAATGTTCTCTTAGATGAAAACTTAGAGCCTCTACTCACTGATTATGGCTTCAGTCCTGTCATCAACCTTGACCATGCTCAACAAGTCATCATGCCATACAAATCACCTGAGTATGCTCAACTTGGACGCATTACAAAGAAAACAGACGTGTGGAGTTTAGGAATTATAATACTTGAGATCTTGATTGGCAAATTCCCAGAGAACTATCTCACACACAGGCATAATCCTGATTCTGACATAGCCAGTTGGGTGAATAACATGATTACTGAGAAGCGCACCACTGAGTTGTTTGATGTAGAGATGGGTGGAATAGGTAATAATAAAGCTGAATTGCTCAAACTCTTAAAGATTGGATTGAGTTGTTGTGAGGAGAATGTTGAGAGAAGGTTTGATATTAAGGAAGCTGTTGAGCAGATTGAAGAATTGAAAGTGGGTGATGAAACTGATATCATTGGAGATCAATACTCTTCTTCTCTCATCACCACGGAAATGGATTCTTATAGAGCAGTGTGA 2064 0.4123 MPMGARSAMLVRAPPTSIYSHHNVYFFVLVLLLSIPCSCEYVSDREALLKFKNSLKNVVSLSSWDPTINSKPPCSGNVPNWVGLLCMNDRVWGLRLENMGLTGNIDVESLGSMPALRTLSLMNNTFVGSLPNIKMLTNLKALFLSYNHFSGEIPNDAFSTLQKLRKVYLSNNEFTGKIPSSLATLPNLLILALNSNKFQGQIPDFPQKKLRTLNLSNNDFEGSIPTNLTSFDASSFTGNSRLCGAPLKNPCKGEAPTSESSAAGNMRIVKILLIIVIIVGLIVALLVIVLVIWPRLSSNNYSNNPSEESSFQAGVQPSNKYDNNHPPVYVKTKSLAEHHHDDHHRHGHGHGHGHGHGHTKRGEQGGKLTFLRHEGQMFDLQDLLRASAEILGSAGFGSSYKAVIMDGQAVVVKRYKQMNNVGREEFHEHMRRLGNLNHQNILPLLAYYYRKEEKLLISSYVHNGCLATHLHGNHNYQKPGLDWPTRLKIVKGIARGLDYLYNALPSLIVPHGHLKSSNVLLDENLEPLLTDYGFSPVINLDHAQQVIMPYKSPEYAQLGRITKKTDVWSLGIIILEILIGKFPENYLTHRHNPDSDIASWVNNMITEKRTTELFDVEMGGIGNNKAELLKLLKIGLSCCEENVERRFDIKEAVEQIEELKVGDETDIIGDQYSSSLITTEMDSYRAV* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1813 687 Gene3D Ribonuclease Inhibitor 207 254 IPR032675 -
Lan6g1813 687 MobiDBLite consensus disorder prediction 343 357 - -
Lan6g1813 687 Pfam Leucine Rich Repeat 209 228 IPR001611 GO:0005515
Lan6g1813 687 Pfam Protein kinase domain 388 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1813 687 ProSiteProfiles Protein kinase domain profile. 385 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1813 687 MobiDBLite consensus disorder prediction 302 325 - -
Lan6g1813 687 Gene3D Phosphorylase Kinase; domain 1 355 460 - -
Lan6g1813 687 Pfam Leucine rich repeat 137 198 IPR001611 GO:0005515
Lan6g1813 687 SUPERFAMILY L domain-like 71 231 - -
Lan6g1813 687 MobiDBLite consensus disorder prediction 338 364 - -
Lan6g1813 687 Pfam Leucine rich repeat N-terminal domain 43 86 IPR013210 -
Lan6g1813 687 Gene3D Transferase(Phosphotransferase) domain 1 461 676 - -
Lan6g1813 687 Gene3D Ribonuclease Inhibitor 43 156 IPR032675 -
Lan6g1813 687 Gene3D Ribonuclease Inhibitor 157 206 IPR032675 -
Lan6g1813 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 670 - -
Lan6g1813 687 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 22 670 - -
Lan6g1813 687 SUPERFAMILY Protein kinase-like (PK-like) 389 662 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1813 Lan-Chr6 29472463 29475101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1813 20 686 Receptor kinase-like Gene Family AT5G35390 46.657 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan6g1813 Pkinase 3.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1813 - - gmx:100801053 895.575