Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1806 ATGATGATGGAAGGCGGTGCGAAATTCCCTGGAATATTAATAGACCTGAACAAGCATCATAATGATTATGAATTCTCTGAAGGAGGTGGATTTTATCATAAGCTTGATCTGAATGACGGTACCAATATGTCCATTGACAGCTTGCAAACTACCAATGGTGGAGGATCTGTTGCCATGTCTGTTGACAACAGCAGCGTCGGCTCCAACGATTCCCACACTCGCATTTTGAACCACCAAGGCTTGAAGAGACGTCCCAATGATAACTACTCTATTGCTCACAGTGTCAATCGTCGAGGAAGAGTCACACATGCTTTGAGTCATGATGCTTTGGCTCAGGCTCTCATCGACACTAATTCCCCAACTGAGGGTCTTGACAATTTTCATGAGTGGACCATTGATTTGAGGAATCTTAGTATGGGTGAGCCTTTTGCTCAAGGGGCTTTCGGAAAACTTTACAGAGGCACTTACAATGGTGAGAATGTTGCTATCAAACTCTTGGAGAGGCCTGAAAATGATCCACCAAAGGTTCAGTTCATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACTAAAGCATCCTAACATAGTTCGCTTCATTGGTGCATGCCGTAAGCCAATGGTGTGGTGCATCGTCACAGAATATGCCAAAGGTGGTTCAGTTCGTCAATTTTTAATGAAGCGTCAAAACCGATCAGTTCCCCTCAAATTGGCTGTCAAGCAAGCTTTGGATGTTGCAAGAGGGATGGCATATGTTCATGGCCTTGGACTGATCCACAGGGACTTGAAATCAGATAATCTTTTGATTTTTGGTGACAAATCGATTAAAATTGCTGACTTCGGAGTTGCCAGGATTGAGGTGCAAACTGAAGGAATGACTCCTGAGACCGGAACATATCGTTGGATGGCTCCAGAGATGATCCAGCATAGGCCTTACACACAAAAGGTGGATGTATATAGCTTCGGAATTGTTCTGTGGGAACTAATGACTGGAATGCTTCCATTTCAGAACATGACGGCAGTACAAGCAGCATTTGCAGTTGTGAATAGAAATGTTCGCCCAGTCATACCCAATGACTGCTTACCTGTTCTCCGTGAGATCATGACAAGGTGCTGGGATCCCAACCCTGATGTTAGGCCTCCATTTTCTGAAATTGTAGGAATGCTTGAGAATGCAGAGAATGAGATCATGACAACTGTTCGGAAGGCTCGTTTTAGGTGTTGCATGGCACAACCGATGACTGCTGAGTGA 1257 0.4471 MMMEGGAKFPGILIDLNKHHNDYEFSEGGGFYHKLDLNDGTNMSIDSLQTTNGGGSVAMSVDNSSVGSNDSHTRILNHQGLKRRPNDNYSIAHSVNRRGRVTHALSHDALAQALIDTNSPTEGLDNFHEWTIDLRNLSMGEPFAQGAFGKLYRGTYNGENVAIKLLERPENDPPKVQFMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELMTGMLPFQNMTAVQAAFAVVNRNVRPVIPNDCLPVLREIMTRCWDPNPDVRPPFSEIVGMLENAENEIMTTVRKARFRCCMAQPMTAE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1806 418 CDD STKc_MAP3K-like 144 391 - -
Lan6g1806 418 Pfam Protein tyrosine and serine/threonine kinase 138 390 IPR001245 GO:0004672|GO:0006468
Lan6g1806 418 SMART serkin_6 137 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1806 418 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1806 418 Gene3D Transferase(Phosphotransferase) domain 1 220 414 - -
Lan6g1806 418 Gene3D Phosphorylase Kinase; domain 1 126 219 - -
Lan6g1806 418 PRINTS Tyrosine kinase catalytic domain signature 215 228 IPR001245 GO:0004672|GO:0006468
Lan6g1806 418 PRINTS Tyrosine kinase catalytic domain signature 253 271 IPR001245 GO:0004672|GO:0006468
Lan6g1806 418 PRINTS Tyrosine kinase catalytic domain signature 299 309 IPR001245 GO:0004672|GO:0006468
Lan6g1806 418 PRINTS Tyrosine kinase catalytic domain signature 318 340 IPR001245 GO:0004672|GO:0006468
Lan6g1806 418 PRINTS Tyrosine kinase catalytic domain signature 362 384 IPR001245 GO:0004672|GO:0006468
Lan6g1806 418 PANTHER SERINE-THREONINE PROTEIN KINASE 3 409 - -
Lan6g1806 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lan6g1806 418 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 3 409 - -
Lan6g1806 418 SUPERFAMILY Protein kinase-like (PK-like) 120 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1806 Lan-Chr6 29397956 29401310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1806 2 418 MAP Kinase Kinase Kinase AT2G24360 74.580 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan6g1806 PK_Tyr_Ser-Thr 9.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1806 - - lang:109350762 832.017