Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1805 ATGGCACTCATCACTGGCACTACACACCACCACCACCACCCTTTGTTTCCATTCTTCATCCCTTTCCTTCTATTTGTTGTTGATGCTGCTTCTGACACAGAATTGCTCCTCAAATTTAAGGACTCCCTTCAAAACAATCAAGTATTATCCTCATGGAATGCATCTACCCCTCCATGTTCAGCTGGCAATTCCCATTGGATAGGCATTCGTTGCTATAATCAACATATATGGGGATTGAAGCTTGAGAATATGAAGCTCAAGGGTGTCATTAATGTGGATTCACTCACCACATTGCCATATCTCAGAACCATAAGTTTCATGAACAATGAATTTCAAAGCACATGGCCAGAGTTAAACAAGCTAGTAGGTTTAAAGAATATCTACCTTTCAAATAACAAGTTCTATGGGGAGATTCCTGATCAAACATTTGTGAATATGAAATGGTTGAAGAAAGTTCACTTGTCAAACAACATATTCACATGTGATATTCCAACATCCCTATCATATTTGACTAGGCTTATCGATTTGAGGTTGGATGGAAACAAATTCACTGGCCACATTCCCCTTTTTCCCAAAACATTGAAATCATTAAATGTAGCTAATAATCAACTAGTGGGAGAAATACCAGTCATCCTTAGTAACATGTCTGCTTCATCCTTTTCTGGCAATCAAAGGTTATGTGGAGCCCCATTGGAAGCATGCTCCAAAAAAAATCCAGCAATTGTAAAGATTATAGTGATTGTGGTACTTGTTGCTGCGGCATTGGTTGTGATTGGTGTAGTAATGTTCGTCCTTCGTAGAAGAAGAAAACAACAACAACAACAACAAACAGATTCTATGGAGAATCCAGGAGCAGGAGCATCAAACAACCAAAAGAAAAGATCAGAAACATCATCATCAGATGATGCGAATAGTGATCAAAGGTCAACAAGGTCTCAAGGCAGTTCCACAAGATCAAAAGGAGAAAACATGAAGTTATCATTTGTGAGGGATGACAGGGAACCATTTGATCTTCAAGAACTGCTGAGAGCTTCTGCTGAGATATTGGGAAGTGGTTGTTTCAGTTCATCATACAAGGCAGCATTGACAGATGGACCAATGATGGTGGTGAAGAGGTTCAAACAAATGAACAATGTTGGAAGGGAAGAGTTCCAAGAACACATGAGAAGGATAGGAAGGTTGAGTCATCCTAATCTGCTTCCACTTGTTGCTTACTATTATAGGAAGGAGGAGAAGCTCTTAATATCTGACTTCGTTCACAATGGCAGCTTGGCTGTTCGCCTTCACGGATACCAAGCTCTAGGGCAACCAAGCCTTGATTGGCCAAGTAGGTTGAAAATTGTGAAAGGGGTAGCAAAAGGTATTGAATATCTGTACAAAGAGATGCCAAGCCTAATTGCACCACATGGACATCTTAAATCTTCTAATGTTCTTCTAAGTGAGTCTTTAGAGCCAATCCTAAATGACTATGGGTTGGTGCCAATTATTAATCAGGATCTTGCTCCTGATTTGATGGTTATATATAAATCCCCCGAGTATTTGCAGCATGGCCGTGTTACAAAGAAGACCGATGTTTGGTGTCTTGGGATACTCATTTTGGAGATCCTAACAGGAAAGTTGCCTGCTAGCTTTCTACAACAAAGTCATCAAGGGAAAGGAAGTGAGTTGAGTTTGGCAAATTGGGTAGATTCAATTGTCCCAGAAGAGTGGAGTAGTGAGGTGTTTGACAAAGACATGGGGGCATACAATTACAATGAGGGGGAGATGGGAAAGCTTTTGAAGATTGCACTGGCTTGTTGTCAAGTGGATGTGGACAAGAGATGGGATTTGAAAGAAGCTGTAGATAAAATCCAAGAGATAAAAGAAAGAGATAATAGTAATGAGAATGAAAATATTGAATCAGAGATTTTGCCTTAG 1917 0.3996 MALITGTTHHHHHPLFPFFIPFLLFVVDAASDTELLLKFKDSLQNNQVLSSWNASTPPCSAGNSHWIGIRCYNQHIWGLKLENMKLKGVINVDSLTTLPYLRTISFMNNEFQSTWPELNKLVGLKNIYLSNNKFYGEIPDQTFVNMKWLKKVHLSNNIFTCDIPTSLSYLTRLIDLRLDGNKFTGHIPLFPKTLKSLNVANNQLVGEIPVILSNMSASSFSGNQRLCGAPLEACSKKNPAIVKIIVIVVLVAAALVVIGVVMFVLRRRRKQQQQQQTDSMENPGAGASNNQKKRSETSSSDDANSDQRSTRSQGSSTRSKGENMKLSFVRDDREPFDLQELLRASAEILGSGCFSSSYKAALTDGPMMVVKRFKQMNNVGREEFQEHMRRIGRLSHPNLLPLVAYYYRKEEKLLISDFVHNGSLAVRLHGYQALGQPSLDWPSRLKIVKGVAKGIEYLYKEMPSLIAPHGHLKSSNVLLSESLEPILNDYGLVPIINQDLAPDLMVIYKSPEYLQHGRVTKKTDVWCLGILILEILTGKLPASFLQQSHQGKGSELSLANWVDSIVPEEWSSEVFDKDMGAYNYNEGEMGKLLKIALACCQVDVDKRWDLKEAVDKIQEIKERDNSNENENIESEILP* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1805 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 630 - -
Lan6g1805 638 SUPERFAMILY L domain-like 56 216 - -
Lan6g1805 638 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Lan6g1805 638 MobiDBLite consensus disorder prediction 302 323 - -
Lan6g1805 638 PANTHER LRR RECEPTOR-LIKE KINASE 16 630 - -
Lan6g1805 638 Coils Coil 610 630 - -
Lan6g1805 638 Pfam Protein kinase domain 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1805 638 Gene3D Ribonuclease Inhibitor 193 235 IPR032675 -
Lan6g1805 638 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Lan6g1805 638 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Lan6g1805 638 MobiDBLite consensus disorder prediction 273 326 - -
Lan6g1805 638 MobiDBLite consensus disorder prediction 275 294 - -
Lan6g1805 638 SUPERFAMILY Protein kinase-like (PK-like) 347 624 IPR011009 -
Lan6g1805 638 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1805 638 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Lan6g1805 638 Gene3D Transferase(Phosphotransferase) domain 1 419 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1805 Lan-Chr6 29389517 29392353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1805 15 629 Receptor kinase-like Gene Family AT5G35390 49.922 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan6g1805 Pkinase 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1805 - - ccaj:109803310 797.349