LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g1798	ATGGATGTCAAAGTTTTTGTTGTTCTTGTTCTTCTTCTTGTTCTTCTTCTTCCAATAATATTAGTCCAATCATTATCCTTCAATATAACTGATTTCAACAATGGTGTGAATGCAAGTAATATGGCATATGAAGGTGATGGCCAACCCATCAATGGATCCATAGAGCTGAACAAAGTCAGCTATTTATTTCGTGTTGGAAGAGCCATTTATGGACAACCTTTGCACCTTTGGGACTCATCAACTAAGGTTGTCACTGATTTCACAACTACTTTCACTTTCATTATTGATAAGGTTAATGATACCTCATATGGTGATGGATTTGCATTTTACATGGCTCCACTTGGTTACCAAATTCCACCAAACTCAGCTGGTGGCACTTTTGCACTATTCAATGCTACTACTAATAGCAACTTGCCTCAAAATCATGTTCTTGCTGTTGAATTTGATACTTTTATAGGCTCAACTGATCCACCTATGAGGCATGTTGGCATTGATGATAACTCCCTCACTTCAGTTGCTTATGCCAGGTTTGATATTGATAATAACACTGGCAATCCATGTCATACTATCATAACTTATAGTGCTTATACCAACAACTTAATTGTATCATGGTCCTTCAATGGAAAGAGTAGTAGTAACTCTAGTTCTCTGTCTTATAACATTGACCTCATGAAAATTCTACCCGAGTTTGTGAATATTGGGTTCTCAGCTTCAACTGGTTTGTCCACTGAAAGAAATGTTATTCAATCATGGCAATTTAGTTCAACTTTAAATTCTTCTGTGGATGGTATAGAGTTAAACAGAGAAAGCAAGAAATCCAAGACAAACAAGGTTGTTGAAGTAGTTGCTATAACATGTCCAATTGTTTTGGTGCTTGTTGGAATTTTTGTTGGTTGGTTAGTGTTAAAGAAGAGAAGAGCCAACGTTGGTGATAATAATGAAAACCTTGGGAATGCTTCAGTGGAATTTGATCTTGACAAAGCAACCATTCCAAGAAGATTTGATTACAAGGAATTACTTGCTGCTACCAATGGTTTCGCAGACGATAAGAGCCTCGGGAGAGGGGCATCCGGACTAGTTTACAAAGGGGTTTTGAGTTATTTGGGGAGAGTTGTTGCTGTCAAGAGGATTTTCGCAGATTTTGAAAATTCGGAGAGGATTTTCATCAATGAAGTAAAGATCATAAGCCGATTGATCCATCGAAACTTGGTTCAATTCATAGGGTGGTGCCACGAGGAAGGTGAATTGCTTTTGGTGTTTGAGTACATGCCTAATGGAAGCCTCGACGCACATCTCTTCGGTGACAAGAAAGCACTACCCTGGGACGTGAGGTACAAGGTCGCATTAGGCGTGGCCTACGCGATTCGCTATCTCCACGAAGATGCAGAGCAGTGTGTCCTTCATAGAGATATTAAGTCAGCTAATGTTTTATTGGACACAGACTTCAGCACTAAGCTGGCTGATTTTGGGATGGCAAAGTTGGTTGACCCAAGATTAAGGACTCAAAGGACAGGAGTGGTAGGGACATACGGGTACTTGGCGCCGGAATATATCAATGGAGGGAGGGCTAGTAAGGAATCAGATATCTATAGTTTTGGTGTAGTGGCATTAGAAATTGCATGTGGAAGGAGGACTTACCAAGATGGAGAATTTCATGTGCCAATTATAAATTGGATATGGCAACTTTATGTGGAAGGGAATGTGCTAAATGCTGCTGATGAGAGATTGAATAAGGACTTCAATGAAGACGAAATGTTAAGTTTGTTAACATTAGGACTATGGTGTACACATCCAAATGATAAGGAGAGGCCAAAAGCAGCACAAGTAATTAAGGTTCTTCAGTTAGAAGCTACATTACCAGTAATTCCATCTAACATTCATGAACGTTCTTCTCATCTAACCCATACCCATTATTCCTCTCATTCACAACCAATCACTACAAGCCTTGTTCATGTTGGACGTTAA	1965	0.3944	MDVKVFVVLVLLLVLLLPIILVQSLSFNITDFNNGVNASNMAYEGDGQPINGSIELNKVSYLFRVGRAIYGQPLHLWDSSTKVVTDFTTTFTFIIDKVNDTSYGDGFAFYMAPLGYQIPPNSAGGTFALFNATTNSNLPQNHVLAVEFDTFIGSTDPPMRHVGIDDNSLTSVAYARFDIDNNTGNPCHTIITYSAYTNNLIVSWSFNGKSSSNSSSLSYNIDLMKILPEFVNIGFSASTGLSTERNVIQSWQFSSTLNSSVDGIELNRESKKSKTNKVVEVVAITCPIVLVLVGIFVGWLVLKKRRANVGDNNENLGNASVEFDLDKATIPRRFDYKELLAATNGFADDKSLGRGASGLVYKGVLSYLGRVVAVKRIFADFENSERIFINEVKIISRLIHRNLVQFIGWCHEEGELLLVFEYMPNGSLDAHLFGDKKALPWDVRYKVALGVAYAIRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLADFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDIYSFGVVALEIACGRRTYQDGEFHVPIINWIWQLYVEGNVLNAADERLNKDFNEDEMLSLLTLGLWCTHPNDKERPKAAQVIKVLQLEATLPVIPSNIHERSSHLTHTHYSSHSQPITTSLVHVGR*	655

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g1798	654	ProSitePatterns	Legume lectins alpha-chain signature.	227	236	IPR000985	-
	Lan6g1798	654	MobiDBLite	consensus disorder prediction	636	654	-	-
	Lan6g1798	654	SMART	serkin_6	346	618	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g1798	654	PANTHER	-	8	632	-	-
	Lan6g1798	654	MobiDBLite	consensus disorder prediction	635	654	-	-
	Lan6g1798	654	ProSitePatterns	Protein kinases ATP-binding region signature.	352	375	IPR017441	GO:0005524
	Lan6g1798	654	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	466	478	IPR008271	GO:0004672\|GO:0006468
	Lan6g1798	654	Pfam	Legume lectin domain	24	258	IPR001220	GO:0030246
	Lan6g1798	654	ProSitePatterns	Legume lectins beta-chain signature.	144	150	IPR019825	-
	Lan6g1798	654	ProSiteProfiles	Protein kinase domain profile.	346	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g1798	654	CDD	lectin_legume_LecRK_Arcelin_ConA	25	257	IPR001220	GO:0030246
	Lan6g1798	654	PANTHER	PUTATIVE-RELATED	8	632	-	-
	Lan6g1798	654	Gene3D	-	22	266	-	-
	Lan6g1798	654	Pfam	Protein kinase domain	347	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g1798	654	Gene3D	Phosphorylase Kinase; domain 1	311	422	-	-
	Lan6g1798	654	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	257	IPR013320	-
	Lan6g1798	654	SUPERFAMILY	Protein kinase-like (PK-like)	330	636	IPR011009	-
	Lan6g1798	654	Gene3D	Transferase(Phosphotransferase) domain 1	423	620	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g1798	Lan-Chr6	29311073	29313262	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g1798	8	632	Receptor kinase-like Gene Family	AT5G10530	44.828	4.13e-180	525

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lan6g1798		Pkinase	2.7e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g1798	-		-	vun:114193012	879.782