Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1790 ATGGCATTGTTCAGGAAATTCTTCTATAAGAAGCCCCCTGATGGGCTTTTAGAAATCAGTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCGCGGATGTAATGGAAGAAGATAAACATAAAGGTTATATAGAGGGAATAATTGCGCAACTTCACGGTCACTTCCCCGATGCTTCATATATGGTGTTCAACATGCGTGAGGGAGAAAGCCCAAGCCATATCTCTAACATTTTATCCGACTATGATATGATGGTGATTGACTATCCTCGTCAGTATGAAGGTTGCCCATTACTCACCATGGAGATGATCCACCATTTCTTGAAATCGGGTGAAAACTGGGTTCAACTCGGACGGCAAAATCTTATCTTGATGCATTGTGAACGAGGCGGGTGGGCGGTTCTAGCGTTTATGCTGGCTGCATTCTTGATTTATAGAAAGCAGTTTACCGGGGAGCAGAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAGCTTTTGCAATTGATGTCACCATTGAATCCATTACCTTCACAATTGAGGTATCTTCAGTATATATCAAGAAGAAATGTTGGTTCGGAATGGCCTCCTCTAGATAGGGCACTTACATTGGATTGTGTAATTCTAAGACTTGTTCCTAAAATGGATCGAGAAGGTGGTTGCCGTCCTATATTTCGGATATACGGACAGGACCCTTTTATGGCTGCTGATCGGACTCCCAAAGTTCTGTTTTCAACTCCAAAGAGGAGCAAACTTGTTCGGTACTACAAGCAGGCTGATTGTGAATTGGTTAAGATTGACATCCATTGCCATGTTCAAGGAGATGTTGTTCTCGAGTGTATTAGTCTGGACAGTGATTTGGAACGTGAAAACATGATGTTTCGAGTTATGTTTAATACAGCATTCATAAGATCAAATATCTTGATGCTTAACCGTGATGAAATTGACATATTATGGAATACTAAAGACAACTTCCCTAAAAATTTCAGAGTAGAGGCTCTTTTCTCCGATATGGAAGCTTCGTCTTCCGTTATTCCAATGGGTATGCCTTGTATTGAGGAGAAAGAAGGCCTACCGGTTGAAGCATTTGCTAAGGTCAAAGAAATGTTCAACAATGTTGATTGGCTAGATTCAAATACAGAAGTAGCAAATGTGCTTCAACAGATCACAGCATCAAATATCCTTCTTGAAAGATTGGACAGTGGCATTTCTTCCCCAACAAGCAAACTGCTTAAGGAGACATTATCCGGAGGATTTAAATTCGATTTGAAGACACAAAACAATATGAAAAATTCACCTTCCGCAGCTCACAGGAGATCTATAACCTCATTTGGATCATCTTCATATGCTCCAATGGAAAAGATAGAGCAATTTGAATCAAAAGCATTGCCTGAAAATTACATCAGGCCTCTTGCACTTCAGCATATCGAACCATCAGGATCAAAGGAATCGTTGGAAAATGATACGAACTTTCCTACATATATGGTTCAAGGGAAACAATCTATTCCCTTAATTGAACCATCAATGGATACAACAAGTTCAATGGAAAAAAGGACTAAACCATCAGAATCCAAGGAAATGGATATTGATTCACTAGAACCAAAGGAATCATTGGATAATGACACCAAGTTTCGTACATCATTGGCTCAGGGTAAACAATCTATTCCCTCGACTGAACCATCCACTGATGCAAATTCAATGAAAGAGAAGATTGAACCTCTTGAATCAAATGAAAAAGAGATTGAATCACTAGACATGAAGGCATTGTCGAAAAATGATGGACGATCTATATTTGAACCGAAGACACTGTCAGAAATTGAGGATGGTCTTATGGTAAAGAAGATTGAACCATTAGAATCAAAGGCATTGCCAGAAAATAACATGAAGACTCTTGCACCTACGGATCAGGAGAAACAACCTATTCCATTAACTGGAATATCAACAGATTCAAATTCTACTGAAATGCAGATTGAATCATTAGAATCAAAGGAATCATTGGAAGAAATTACCATGTTTCCTGTATCAGTGGCTCAAGGGAAAAAACCTACTCCACTAAATGAACCATCACTTGGCGAGAAGGGTCATCTGTTAGAGCTAAATAAAAAGGAGGTTGAATCATTAGGATCGACTACATTGTTGGAAAATGATAGAAGATTAAAGTTTGAACCAAAAGTGCTGCCAGAAACTGAGATGAAGGGTCCGAGTTCTGAAGTTCAGGAAAAACTTTCTATGTCGTTATTTGAATCATCTGAGGTTACTCCTGTGAAAAAGAAGATAGAAACATTAGAATCAAAGGCATCACCGAAAAATAGCAAGTCTCTTGCCCCTGTGGAACAGGAGAAGCAAACTATTCCCTCTTCTGGACTCTCAACACATTCAAATTCTACTGATATGATCGAACCTTTCGAATCAAACACATTGTTGGAAAATGTTACAAACTTTCCTGTATCTGTGGCTCAAGGGAAAAAGTCCACTACTCCCTTTGTTGAACAATCAATGGATGCAAATTCAGCGAAAAAGAAGATTGGATCATTAGAGTCAAAGGCATTGTTAGAAAATGATGACATGTATTCTACATCAAAGGATGCAAGTTTAGTGAAAAAGAAGATTGGATCATTAGAATCGAAGGAAAAGGACACTGAATCGTTAGAATCGAAGCCATCGTTAGAAATCGATGACATGTATTCTACATCAAAGGATGCAAGTTTAGTGAAAAATAAGATTGGATCATTAGAGTCGAAGGGAAAGGATACTGAATCATTAGAATCAAAGGCATTGCTAGAAAATGATGACATGTGTTCTACCTCAAAGGATGCAAGTTTGGTGAAAAATAAGACATGGCCATTAGAGCCAAATGAAAAGGATACTGAATCATTAGAGTCAAAGGCATTGTTGGAAAGTGATGTCAATCATTCGACATCTATCTCTCAGAGGAAACAATCTATTCCCGTAGTTGAACCATCCATGGATGTGAATTCAGTGAGAAAGTTGAGCGGAGAATTAGAATCAGAAATGTTGTCAGAAAATGATATCAAGAGTCTTGCATCCACAGTTCAGAGGAAACAAGATAGTCCGTCACTTGACCCTCTTTCAGTTGATACGGCAAACTCAATTAACAAGAAGATTGAACCTCAAAAGTTACAGGTTGCTGTTGAGTTACCCGCACAATCTAAAATCATATCTCCACAGGATCACGCACCGATCGGTAATATCAAACATGTCACTCAAGAATTGATGATATCTACCCCTTCTTCTATTTTACCTCCTTCAGATTCAAAGGTGCCGAAATCTGTAGAGCCTAGTTCTACAAGTGTTCCTCCAGCATCATCATCACCAGCATTGCCGCCATCTAAAGTGGATGCTCTTTCCGCAAAGCAGAAGACTTCTCAATCATTTGTTCCTCCTCCACCACCTCTTCCTCAACATGAGCCTAGTTCAAAATTGATGCAGCCTATTGTTATAAATGCAATGCATGATAAAGGTAAAAAATTATTAGTTACTCCCCCTCCTCCACCTCCACCTCTTCCTGCAACATCCCTTTCCACAGTCAAAGATTCATTTAAAGGTCCTCCTCCGCCTCCGCCTCCGCCTCCGTTGAGTACAAACAAATCAGCTGCTTCAACTGGAAAGACCTCACCATCTTCAATACCTCCACCACCTCCAGCTCCTCGGCATTGTTCCACCACATCTGCTCCTACTCTTACAGCATTGGCCCCACCACCTCCACCTCCTCCATTGTCTAAGAACTCTGATGTTCCATCTAAGCCTGTACCCCCTCCTCCTTCCCCTCCTACTACAAAATCTGACGCTGCATTGCTGCAGCCTCATGCACCTCCAGTCCCTGGACCGCCTGGTGTTCCGTTTGGTGCAAAGGGTCGTGGCCTATTTCGAGCTAACCCAAAAGGTCCGTCTCAGACTAAACGGAGCAATCTGAAACCTTACCATTGGTTAAAACTAACAAGAGCCGTGCATGGAAGCTTGTGGGCTGAGACACAGAAGCTTGAAGAAGCTTGTAGGGCTCCGGAGTTTGACATGTCAGAACTTGAGAGCCTATTCTCTGCAGCTGCTCCAAATTCTGATCATGGAAAAGAAGGAAATTCAAATCGCCGTAACTCGCGGCAAAAAGTTGACAAAGTGCAACTGATTGAGCTCAGGCGGGCTTATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGATTTAATGAGTGCAGTGCTTGCAATGGATGATTCAGTATTATATGCTGATCAGGTTGAGAACCTCATAAAGTTCTGTCCAACCAAAGAAGAGATGGAGCAGCTCAAGGGCTATACTGGAGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCTTAGAAATGATGAAAGTGCCAAGAGTGGAAAACAAGCTAAGAGTTTTTTCGTTTAAGATGCAATTCTGTTTGCAGGTGAAAGATCTTAGAAGGGACTTGAATATTGTGAACTCTGCATCTGAAGAGATCAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTTTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCTGCTATTGGGTTTCGGTTGGATAGTCTCCTTAAACTCACTGATACACGAGCGAGGAACAATAAGATGACTCTAATGCATTACCTTTGTAAGGTGCTAGCTGAAAAGCTTCCGGAACTATTAGATTTTCCCAAAGACCTGTTGCATTTAGAGGGTTCAACCAAGATACAATTAAAATATTTGGCAGAAGAAATGCAAGCTATTAGTAAAGGACTAGAGAAAGTTGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAATGCTTTTGCCAGATTTTAAAGGAATTTCTTAGTGATGCTGAATCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCCCTTTACTTTGGAGAAGATCCGGCACGTGTCCCATTTGAACAAGTCGTATCTACTCTGCTAAACTTTGTGAAGATGTTCATCCGAGCGCATGATGAAAATTGCAAACAGATTGAATATGAAAAAAAGAGAGCGGAAAAAGAAGCAGAAAAGCTAGCTGGTAAAAAGGACTCTGAACATATGAAAAGGAGTATCAAGATTGGTAATAGTAAATGA 5160 0.4047 MALFRKFFYKKPPDGLLEISERVYVFDYCFTADVMEEDKHKGYIEGIIAQLHGHFPDASYMVFNMREGESPSHISNILSDYDMMVIDYPRQYEGCPLLTMEMIHHFLKSGENWVQLGRQNLILMHCERGGWAVLAFMLAAFLIYRKQFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVILRLVPKMDREGGCRPIFRIYGQDPFMAADRTPKVLFSTPKRSKLVRYYKQADCELVKIDIHCHVQGDVVLECISLDSDLERENMMFRVMFNTAFIRSNILMLNRDEIDILWNTKDNFPKNFRVEALFSDMEASSSVIPMGMPCIEEKEGLPVEAFAKVKEMFNNVDWLDSNTEVANVLQQITASNILLERLDSGISSPTSKLLKETLSGGFKFDLKTQNNMKNSPSAAHRRSITSFGSSSYAPMEKIEQFESKALPENYIRPLALQHIEPSGSKESLENDTNFPTYMVQGKQSIPLIEPSMDTTSSMEKRTKPSESKEMDIDSLEPKESLDNDTKFRTSLAQGKQSIPSTEPSTDANSMKEKIEPLESNEKEIESLDMKALSKNDGRSIFEPKTLSEIEDGLMVKKIEPLESKALPENNMKTLAPTDQEKQPIPLTGISTDSNSTEMQIESLESKESLEEITMFPVSVAQGKKPTPLNEPSLGEKGHLLELNKKEVESLGSTTLLENDRRLKFEPKVLPETEMKGPSSEVQEKLSMSLFESSEVTPVKKKIETLESKASPKNSKSLAPVEQEKQTIPSSGLSTHSNSTDMIEPFESNTLLENVTNFPVSVAQGKKSTTPFVEQSMDANSAKKKIGSLESKALLENDDMYSTSKDASLVKKKIGSLESKEKDTESLESKPSLEIDDMYSTSKDASLVKNKIGSLESKGKDTESLESKALLENDDMCSTSKDASLVKNKTWPLEPNEKDTESLESKALLESDVNHSTSISQRKQSIPVVEPSMDVNSVRKLSGELESEMLSENDIKSLASTVQRKQDSPSLDPLSVDTANSINKKIEPQKLQVAVELPAQSKIISPQDHAPIGNIKHVTQELMISTPSSILPPSDSKVPKSVEPSSTSVPPASSSPALPPSKVDALSAKQKTSQSFVPPPPPLPQHEPSSKLMQPIVINAMHDKGKKLLVTPPPPPPPLPATSLSTVKDSFKGPPPPPPPPPLSTNKSAASTGKTSPSSIPPPPPAPRHCSTTSAPTLTALAPPPPPPPLSKNSDVPSKPVPPPPSPPTTKSDAALLQPHAPPVPGPPGVPFGAKGRGLFRANPKGPSQTKRSNLKPYHWLKLTRAVHGSLWAETQKLEEACRAPEFDMSELESLFSAAAPNSDHGKEGNSNRRNSRQKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLAMDDSVLYADQVENLIKFCPTKEEMEQLKGYTGDKDNLGKCEQFFLEMMKVPRVENKLRVFSFKMQFCLQVKDLRRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLLHLEGSTKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSECFCQILKEFLSDAESEVRSLAQLYANVGRNADALALYFGEDPARVPFEQVVSTLLNFVKMFIRAHDENCKQIEYEKKRAEKEAEKLAGKKDSEHMKRSIKIGNSK* 1720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1790 1719 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lan6g1790 1719 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 1187 1201 - -
Lan6g1790 1719 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Lan6g1790 1719 SMART it6_source 1300 1715 IPR015425 -
Lan6g1790 1719 Gene3D Formin, FH2 domain 1320 1714 IPR042201 -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 1082 1108 - -
Lan6g1790 1719 PANTHER FORMIN-J 1203 1711 - -
Lan6g1790 1719 PANTHER FORMIN-J 1 1223 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 1697 1719 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 516 542 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 621 661 - -
Lan6g1790 1719 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Lan6g1790 1719 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1301 1701 IPR015425 -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 1082 1311 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 543 564 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 1235 1266 - -
Lan6g1790 1719 Pfam Formin Homology 2 Domain 1304 1675 IPR015425 -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 640 659 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 766 798 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 674 694 - -
Lan6g1790 1719 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1377 1702 - -
Lan6g1790 1719 SMART PTEN_C2_2 197 337 IPR014020 -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 870 888 - -
Lan6g1790 1719 Gene3D - 196 341 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 504 569 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 759 798 - -
Lan6g1790 1719 MobiDBLite consensus disorder prediction 870 891 - -
Lan6g1790 1719 Gene3D Protein tyrosine phosphatase superfamily 13 191 IPR029021 -
Lan6g1790 1719 Coils Coil 1676 1703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1790 Lan-Chr6 29251731 29261865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1790 1 414 FH2 protein (formin) Gene Family AT2G25050 68.510 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1790 - - aprc:113848213 1632.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0933 10 13965769 13977757 Lan6g1790 6 29251731 29261865 LSH