Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1789 ATGGATCAAAAGGTTTCAACTTTGGAAGTGGAGTTACAACATGTGAAAGAGGAGAATAATGCTCTAAGATTGATGCTTGAAGATCAGAGAAGGAAATACAAGAATCTTCAATCGTATCTTCTAGAGATCAAAAATAATGTACATAATCTTGATACAAACAAGAGAACAAGACTTAAAGAGTTTCCAACCGCAAAAAAGCCTTTACAAGTTTATGTTAGAACCCACCCCAACGACGATAGTTTGATAATAAAAGATGGATATGAATGGAGGAAGTATGGGCAAAAGGTTACTAAAGACAATGCTTCTCCTAGAGCTTATTTCAGGTGCTCTATGGCTCCTAACTGCTCAGCCAAAAAGAAGGTGCAAAGAAGTGTATATGATAGGTCTATAATTGTTGCAACTTATGATGGAGAGCATAACCATGATGATGAGTCATTCTTACCATCATCTTCCACACCCAAAGACTCATTCTTACCTCTTACAATCATACAAAATTACAAAGAAGCCCTTAACATTGACCATGCTCTTTCAACAAATAAAAAACCTTGTAAGGATATTATGGACTATGGCAACAACAACAAAAACAACATGAAAATTGAAGAATATGTAAGTTCATTAATGAATGATCCTGAGTTCACTGTAACAATAGCTGAAGCAGTTGCCCACTCCATCATTGCTCAACCTAAGCAACAATGTCTAAATCTCAATTTGGGTCTTCCACAATAA 726 0.3567 MDQKVSTLEVELQHVKEENNALRLMLEDQRRKYKNLQSYLLEIKNNVHNLDTNKRTRLKEFPTAKKPLQVYVRTHPNDDSLIIKDGYEWRKYGQKVTKDNASPRAYFRCSMAPNCSAKKKVQRSVYDRSIIVATYDGEHNHDDESFLPSSSTPKDSFLPLTIIQNYKEALNIDHALSTNKKPCKDIMDYGNNNKNNMKIEEYVSSLMNDPEFTVTIAEAVAHSIIAQPKQQCLNLNLGLPQ* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1789 241 Coils Coil 5 46 - -
Lan6g1789 241 Pfam WRKY DNA -binding domain 84 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1789 241 Gene3D WRKY domain 68 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g1789 241 ProSiteProfiles WRKY domain profile. 78 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1789 241 PANTHER WRKY TRANSCRIPTION FACTOR 49 2 224 - -
Lan6g1789 241 SMART WRKY_cls 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g1789 241 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 224 IPR044810 GO:0003700
Lan6g1789 241 SUPERFAMILY WRKY DNA-binding domain 79 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1789 Lan-Chr6 29250049 29251561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1789 69 227 WRKY Transcription Factor Family AT1G80840 41.243 1.61e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g1789 WRKY 3.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1789 - - gmx:100170679 282.722