Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1778 ATGTTGCGGTTGTTTCCATTTTCTCATCCCAGATTTCCAAACCTCAAAAATTCAGGAATGGCTAGAGAAGTCATTGCTTCTGCATCACCTACTTCTCCATCAACTGCTTCTTTCGAGTATGAGATCTTGGATGGTAACGCTGAAATCCTTCAAACTGTTAGAGCCTCATCCAGTCACGCAAGTTCATGGACTGAACCTGAAAGGTTGAAGCTCAGACACAGAATTGGCCGAGGGCCCTTTGGTGATGTTTGGCTAGCAACACTTCATCAATCAACTGAAGATTATGATGAGTTCCATGAAGTTGCGGCTAAGATGTTATATCCAATCAAAGAGGATCATATGAAGATTGTATTGGAGAAATTCAATGAATTATATTTTAAGTGCCAAGGAGTTGCTAGTATTTGCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTACGAGGGTTCAATTGGTGACAAGATGGCTAGACTCAGAGACGGAAGAATTTCGTTGCATGATGTTTTGAGGTATGGAATCAATTTGGCTGAGGGTATTCTGGAACTTCACTCTATAGGGGTCCTCATTCTCAACCTTAAACCATCTAATGTTCTTCTCGATGATAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCCAATATTTTGCTTGGCACCTCATTCCTAAGTTCAGATATGGCTCAGAGGCTTGGAACTCCGAATTACATGGCTCCAGAACAACATGATCCAGAGGTCAGAGGCCCTATATCGTTTGAAACAGATTCTTGGGGATTCGGGTGCACCATTGTTGAAATGTTGAGTGGTATTCAACCTTGGTATGGATGCCCTGTCGGTAGAATATATCAATCAGTTGTTGAGAAACATGAGAAACCCCAGATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATCTCCTTGTTGGGTGCTTTGAGTATGATTCGAGGAATCGTCCTTTAATGGTGGATATTCTAAGTGTCTTCAAAAGGTCACTGAATGAACTGGCCAATGATGGAGGATGGAGATATCTTGGTAATGTGAAAGTTACTCCAAAATCTAATAGCACTGGCTACACACAGTGGTTCCTCTCGAAGGATAATCTTCAAGTGGGCGATATGGTTCGATCTAGAAAGCCTCTCAGTTCATGTAAACCTCAAAACATGGATATCCCGGAAGGAACTGTTGTTGGTAACACAGATAACGGGTCCGTCCTTGTAAGGGTCCCTGGTATTCACGACCCTTTAAGAGTTCACGTGTCAACTCTCAAACGCATAACATCTGGCTTGGCAGCTGGTGATTGGGTACGTTTGAAGGATGAAAACGGGAAGCACTCGTCAGTGGGCATTCTACATTCCATCAATCGAGACGGAAGTGTGGCTGTTGGATTTATTGGGCTGCAAACTCTATGGAATGGAAATTCTTCACAACTGGAAACGGCAGAATCTTACTGTGTGGGCCAATTTGTTAGGCTGAAAGAAATCGTTGTAAGTCCTCGATTCGAATGGCGCCGTAAAAGGGCAGGGGCATGGGCCACTGGTAGGATTTCATGGATCCTACCAAATGGGTGTTTGGTTGTTAAGTTCCCAGGGTTGTTGCCTTTCGGGAATGAATCGAGTACTTTCCTCGCCGATCCCTCTGAGGTTGAAGTGGTTGGTTTCAAGACATGTCCTGGGTTGATAGAAAAGTATCAACATATAGAGGATCATCACTGGGCTGTTAGACCCGTTCTCATCGCATTCGGCCTTTTTACCGCTATGAAACTCGGTATATTAATCAGCAAGAAAGCGGGGAGGAGGAACATGAACAAGGTTAACGCGATTGAAAGTGAAAGCGACGGCCAAAATGCTAGCAAGTCAAAACCTGGTGCGGTAAATCCGGGCAACAACACAACATGGGTTCCTTCTGTTGCTAATATCATGTTCAAAGAAGGTATTAACAATTCCAATAGCAGGTAG 1971 0.4338 MLRLFPFSHPRFPNLKNSGMAREVIASASPTSPSTASFEYEILDGNAEILQTVRASSSHASSWTEPERLKLRHRIGRGPFGDVWLATLHQSTEDYDEFHEVAAKMLYPIKEDHMKIVLEKFNELYFKCQGVASICWLHGISVLNGRICIIMNLYEGSIGDKMARLRDGRISLHDVLRYGINLAEGILELHSIGVLILNLKPSNVLLDDNDQAILGDVGIPNILLGTSFLSSDMAQRLGTPNYMAPEQHDPEVRGPISFETDSWGFGCTIVEMLSGIQPWYGCPVGRIYQSVVEKHEKPQIPSGLPSSVENLLVGCFEYDSRNRPLMVDILSVFKRSLNELANDGGWRYLGNVKVTPKSNSTGYTQWFLSKDNLQVGDMVRSRKPLSSCKPQNMDIPEGTVVGNTDNGSVLVRVPGIHDPLRVHVSTLKRITSGLAAGDWVRLKDENGKHSSVGILHSINRDGSVAVGFIGLQTLWNGNSSQLETAESYCVGQFVRLKEIVVSPRFEWRRKRAGAWATGRISWILPNGCLVVKFPGLLPFGNESSTFLADPSEVEVVGFKTCPGLIEKYQHIEDHHWAVRPVLIAFGLFTAMKLGILISKKAGRRNMNKVNAIESESDGQNASKSKPGAVNPGNNTTWVPSVANIMFKEGINNSNSR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1778 656 MobiDBLite consensus disorder prediction 612 636 - -
Lan6g1778 656 Gene3D Phosphorylase Kinase; domain 1 35 154 - -
Lan6g1778 656 Gene3D Transferase(Phosphotransferase) domain 1 155 353 - -
Lan6g1778 656 ProSiteProfiles Protein kinase domain profile. 69 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1778 656 PANTHER OS06G0639500 PROTEIN 29 653 - -
Lan6g1778 656 PANTHER OS06G0639500 PROTEIN 29 653 - -
Lan6g1778 656 SUPERFAMILY Protein kinase-like (PK-like) 65 331 IPR011009 -
Lan6g1778 656 Pfam Protein tyrosine and serine/threonine kinase 69 331 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1778 Lan-Chr6 29086529 29092469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1778 68 340 MAP Kinase Kinase Kinase AT2G17700 23.913 6.82e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lan6g1778 PK_Tyr_Ser-Thr 7.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1778 - - gsj:114393396 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1778 6 29086529 29092469 Lan15g1038 15 19437011 19441352 PCT
Lan15g1038 15 19437011 19441352 Lan6g1778 6 29086529 29092469 PCT