Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1768 ATGAGAATGGATTGTTCTCCAGAACCATGTAGCATTAAGAAGAAAGATGAAGATGAAGAATCTTCTTGTATCAATACTTCTCAATCTCCTCAACTTCAAGAATCACCATTTCTCAAATTCATAAGCAATTTATCTCCAATACAGCCTGTCAAATCATGTCACATGACACAAGGTTTTGTTGGACTCAGTTCTCCACCTATTGTATTCATGTCACCACGCATTAGCTGTCACAGTGAAACGAAGTTCTTGGAAAGGACTCAATCACTCAGTGCAGACATATCTGAAAGTGACAATGGGGGCAAAAGTCTTGTTAATGAACTTCCCGGTGATTCCATCAATTTGCGTTCTCAACTGTCGCTGCCCGGGAGTTTTACAACAGACACCACTCAGACGGATGTTGTCATCAAGAATGATGCAAACACTCAAAACTGCAGTCCCTCGGCATCTGTTGATGAATATTTGGCTGATCCCGTGGACATTGATCGAATCTATTCAGCCAACCCAGATGTCAAACTGTCTGATGATGCAATTGAAACATTAAAACATGGTAGTGAAGATGGTCCTGGTGATAGAGCAGAGCAAACTTTGCTTTTGTCACAGGAATCTAACAAGTTTCATCAAGAAAAGCCAGCATGTGTTGAAGAACCAGGAAAAGTAGAAGAGCAGAAATTGTCTGCAGATGTTTTAGAGACTCAATATCGTCACGATTCACATGCCCAGTGTGCAGGAAGTGAACTGCAGGAATATAGTGATCAAACACCCGAGCCAATGCCTGAACCTGTGAAGGATGCCAAAGAATGTGAAGATTGTGATGAGATGGTGTCAACCTCACATGTGAGTACAGAGAACATCTCCCAATGTGGTTCTGAGGCTACTCTAAAGCACCACGGCATTCGTAGACGTTGTCTACAATTTGGGGAAGTTGCTCTTGGAAGCAACAATTCTCATGCAAACTTGAATGCAACTTCAAGCAAAATGAAAATGGTCAAGCCATCAGGGATTGGGTTGCATTTAAATAGCATCATAAATGCTATCCCACCTGGTTGTGCCGCAACTACTGGTATAAAATCCACATTGTTAATAAGCTTACATAGAATGGACAACATGAAGAGATGCTTAATTTCTTCAAATATGGACGGACAAGCATCGATTGACACTGGAAATGAGAGCCATGAAATTGATGCCTCCACAGCCGCTGACTCCTTAAACTCTGAGTCTCCTAGCTTGGCAGAACCTATTCCCGTAAACCCTGCAAGTGTCCATGGTAAGAGGAAACTAAGCCCCACCGATGCTGGAAATTCTGAGGAGTTCAACCGATCTAGCCCCATCAAGAAAAAGAAGAAAATATCAATCACCAATGATGAGAATAGCTGTAAACGGTGCAACTGTAAGAAGAGTAAATGTTTGAAGCTTTATTGTGATTGTTTTGCTGCTGGAATCTATTGCTCCGACCCATGTTCTTGCCAAGGCTGCTTAAACAGACAAGAATATCAAGAAACTGTTCTTGAGACAAGGCGGCAAATTGAATCGCGCAATCCACTTGCATTTCTTCCCAAAGTTGTACAGCACACAACTGATATTCCTTCAACTAATATGGAGGATGCAAATCTGACGACACCATCATCGGCAAGGCATAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTTGGATGCTCCAGTGGATGTCGATGTGAAGGATGTAAAAATGCCTATGGCAGGAAAGAAGATTATGTTCCAATTGAACATGCTTTGAGCAAAGAAAGGGTGGTTGAACAAGGATCGGATAAGACATTTTACGATAAACTGGACATGGTGGTAAGCAAGCCAGAGTTGTATGACCTACACCGCCTCTCTCCAATAACACCCTCGTTGCAATGCTCTGACCAGGGAAAGGAGGCTGCAAAATCCCGACTTCTTTCTGGAAAATATCTACCATCCCCTGAATCTGCTGATGTCAATATGATCCCATCTCATAAAAAATACACAAAACCTGTGCCAGACTCACATCCAGAAATTGACTCCTATGAATGGCAAATGGATCAATTATCACCCACATGTAATTCAGCTGCAGATGTACTTACTCCTGTCTCATCATATCCTCCCGAGCCAATTTCATTCTCTGCTATAACAAAAGAATCGGCAGATATTCCACAATCGCGACTCTCCCATGCTCCGATTCGCCACTTATCTGGTGGTTCTCTTCGTTGGCGCAGTTCACCAAATACCCCAAGGACCAGAATAAGTGAAACAAAATATGTAGACCAGTCTCTTGAATCAGATAGCAGAAGACTCTTTGACATCCTAGAAGATGAAACACCTGATATATTGAAGGAAGTTTCAACTCCCACTAACCCTGTGAAAGCAAATTCGCCGAACCAAAAGCGAGTTTCTCCTCCCCATGGTCATAGTCATCTACGCGGACTTGGGTTAAGCTCCTCAGGTGGTGGCTTGAAAAGTGGCAGGAAATTTATACTGAAAGCTGTACCTTCTTTCCCACCATTGACCCCGTGCGCTGATTCCAAAGGCAATGATGATGACCATGAGAATTTGGGTAACTGTTCCAGCAAGTGA 2607 0.425 MRMDCSPEPCSIKKKDEDEESSCINTSQSPQLQESPFLKFISNLSPIQPVKSCHMTQGFVGLSSPPIVFMSPRISCHSETKFLERTQSLSADISESDNGGKSLVNELPGDSINLRSQLSLPGSFTTDTTQTDVVIKNDANTQNCSPSASVDEYLADPVDIDRIYSANPDVKLSDDAIETLKHGSEDGPGDRAEQTLLLSQESNKFHQEKPACVEEPGKVEEQKLSADVLETQYRHDSHAQCAGSELQEYSDQTPEPMPEPVKDAKECEDCDEMVSTSHVSTENISQCGSEATLKHHGIRRRCLQFGEVALGSNNSHANLNATSSKMKMVKPSGIGLHLNSIINAIPPGCAATTGIKSTLLISLHRMDNMKRCLISSNMDGQASIDTGNESHEIDASTAADSLNSESPSLAEPIPVNPASVHGKRKLSPTDAGNSEEFNRSSPIKKKKKISITNDENSCKRCNCKKSKCLKLYCDCFAAGIYCSDPCSCQGCLNRQEYQETVLETRRQIESRNPLAFLPKVVQHTTDIPSTNMEDANLTTPSSARHKRGCNCKRSMCLKKYCECYQANVGCSSGCRCEGCKNAYGRKEDYVPIEHALSKERVVEQGSDKTFYDKLDMVVSKPELYDLHRLSPITPSLQCSDQGKEAAKSRLLSGKYLPSPESADVNMIPSHKKYTKPVPDSHPEIDSYEWQMDQLSPTCNSAADVLTPVSSYPPEPISFSAITKESADIPQSRLSHAPIRHLSGGSLRWRSSPNTPRTRISETKYVDQSLESDSRRLFDILEDETPDILKEVSTPTNPVKANSPNQKRVSPPHGHSHLRGLGLSSSGGGLKSGRKFILKAVPSFPPLTPCADSKGNDDDHENLGNCSSK* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1768 868 MobiDBLite consensus disorder prediction 846 868 - -
Lan6g1768 868 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 15 857 - -
Lan6g1768 868 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 15 857 IPR044522 GO:0003700
Lan6g1768 868 MobiDBLite consensus disorder prediction 852 868 - -
Lan6g1768 868 ProSiteProfiles CRC domain profile. 457 584 IPR005172 -
Lan6g1768 868 SMART CXC_2 544 585 IPR033467 -
Lan6g1768 868 SMART CXC_2 456 497 IPR033467 -
Lan6g1768 868 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 547 582 IPR005172 -
Lan6g1768 868 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 459 494 IPR005172 -
Lan6g1768 868 MobiDBLite consensus disorder prediction 383 410 - -
Lan6g1768 868 MobiDBLite consensus disorder prediction 787 828 - -
Lan6g1768 868 MobiDBLite consensus disorder prediction 789 809 - -
Lan6g1768 868 MobiDBLite consensus disorder prediction 1 31 - -
Lan6g1768 868 MobiDBLite consensus disorder prediction 1 22 - -
Lan6g1768 868 MobiDBLite consensus disorder prediction 383 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1768 Lan-Chr6 28965814 28971815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1768 782 848 CPP Transcription Factor Family AT4G14770 46.269 3.79e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan6g1768 TCR 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1768 K21776 - gmx:547664 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0966 10 14621918 14625613 Lan6g1768 6 28965814 28971815 LSH