Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1759 ATGATGAAGAATACTAATGAACATGAGAAGAATGGTAAGAAAGAAAGAGTTGCTTGGTCAGAAGAGTTACACCGCAAGTTCATTGTTGCTGTTAATCACTTAGGAGGAATTGATAAGGCTGCACCGAAAAAAATTATGGCATTGATGAAGGATGAAAAGCTTACAAAGGAGAATGTGGCCAGCCATCTTCAGAAATATAGACTCCATCTTAAAAAAGTTAGCACCACTTTTGTGCCAAACCAAGAGGGTTCGATTCAGTTTCATGCCATCAATGCTGCTGCTGTTGTTCAGAATGTGTCCATCGCTCCTTCGGATGGTGTTTTTGGTCCAAATTCAACCTCGAATGGAAAACGGGACATCAATTTTTGTGAATGGGGTCATGGAAATCGGATCATGGCGCTAACGGAAGAAAACTCATCCTTAATGGAAGAACATCGAGGGTACTTGGGCAACGAACAACACAAGTCTCAAAGCACCTTCATGGCTAATAATCTTGGTTTAATACGAGACTTGGTCACTTCATCTTCCAGCTGCAACTCTCAGGAGTTAACCGAGATTGCTGAGCTGAGACATGAGATGGCAGCGATCAGACACGAGAATCATCAATTGAGGGAGGTCGTCGAAGCAATGAAGGCACAACAAGACATGTTGATGCAGGCTATCTTACAAAGAACAATCGTCCCGCGAAGATAG 693 0.4271 MMKNTNEHEKNGKKERVAWSEELHRKFIVAVNHLGGIDKAAPKKIMALMKDEKLTKENVASHLQKYRLHLKKVSTTFVPNQEGSIQFHAINAAAVVQNVSIAPSDGVFGPNSTSNGKRDINFCEWGHGNRIMALTEENSSLMEEHRGYLGNEQHKSQSTFMANNLGLIRDLVTSSSSCNSQELTEIAELRHEMAAIRHENHQLREVVEAMKAQQDMLMQAILQRTIVPRR* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1759 230 Gene3D - 11 74 - -
Lan6g1759 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 178 - -
Lan6g1759 230 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 69 IPR006447 GO:0003677
Lan6g1759 230 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lan6g1759 230 SUPERFAMILY Homeodomain-like 13 72 IPR009057 -
Lan6g1759 230 Coils Coil 179 213 - -
Lan6g1759 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 71 IPR017930 -
Lan6g1759 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 178 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1759 Lan-Chr6 28828662 28830148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1759 4 116 Response Regulator Gene Family AT3G16857 45.133 1.45e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan6g1759 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1759 - K14491 lang:109350585 459.529