LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g1756	ATGTGGTTACAAAAGAATAGTAGTTGGGATAAGAAAGATGGTGTGAATGGAATAGTGGCAGTAGCAATTGATAAAGATAAAGGGAGCCAAAATGCATTGAAATGGGCCATTGATCATCTTCTTACAAGAAATAACACTGTAGTTCTCATCCATGTCAATGCTAAACATGCTTCTATTACAACCCCAAAGGCCAAAGGTTTTGGTATTAGTGAGCACAATTCATTGGTTTCCAAAGACCCTGATGATCAAACAAAAGAAATTTTTCGACCATATCGTGTCTTCTGTGCAAGAAAAGATTTACACTGCAAGGATGTTGTACTAGAAGATGGAGATGTAGCAAGAGCTTTAATTGAATACACTTCTCACACAGCAATTGAGCATTTGGTTATAGGCTCTTCAAATAAAACTGGTTTTCTTAGATTCAAGGGATCAGATATTCCAGGAATAATATCAAAAGGTGCACCAGATTTCTGTACAATATATGTTGTTTCTAAAGGAAAGATTCAATCTATGAGATCTGCTTCTCGTCCTGTTCCTTTTGTTTCACCTCTTCTTACTCAACTTACTCCAACCTCTCTTAACTCACCAGACCAATCTGATCCACCACGTGTGCCTCTCTCTGGTGGCAGTGTTAAAGGAGAAAGGAGACCTCTGGAAGTTCCTCCACGCAGATCACACGATGGAACAACAGATTCTTTCAGGTCACCATTCACTAGGAAAGGAATGGCAGAAAGATATGTAGAAATTTCCACAGCAGCAGATAGTGATATAACATTTGTAAGCTCAGGAAGATCAAGTATAGACAAATTGTTCCCTACATTAACTAACAATAATACTTCAGAATCTGGCTTTTCCAATCCTAGACTATCATATAGTTCAGATACAGATGCTAACTATAGCTTTGAGTCCTTGAATTTTGGAAGGAGATCTATTGATATCACCTCTCCTGATCACTCTTTCTCTAGTGATGGCTTCTCGTCGTCGTCACAAACCACCGATGATGTGGAAGCTGAAATGAGGAGACTGAAGTTGGAATTGAAGCAAACTATGGAAATGTATAGTACAGCATGTAAAGAAGCACTCTCAGCACAGCACATGGCAGTAGAACTCCAAAGGTGGAAAATAGAGGAAGAGAAGAGAATGGAAGAAGCAAGGATGGCTGAAGAAGCTGCATTGGCAATGGCAGAAAGGGAAAGGGCAAAATCAAAAGCAGCCATTGAGACTGCTGAAGCACAAAAGAGGATAGCAGAATTAGAATCACAGAAGAGACTTAATGCAGAAATGAAAGCACTTAAAGAATCAGAGGAGAGAAGAAGAGCAATTGATGCTTTAGCAAACAAAGATGTAAGGTATAGAAGGTATTCAATTGAGGAGATTGAAGAAGCTACAAGTTTTTTTGCAGAGGCCTTGAAGATTGGTGAAGGAGGTTATGGTCCAGTTTATAAGTGCCTTTTGGATCATACACCTGTTGCAGTTAAGGTTTTGCGTCCAGATGCAGCGCAAGGAAGGTCACAGTTTCAACGAGAGGTTGAGGTACTAAGTTGCATAAGGCATCCAAACATGGTACTCCTCCTAGGAGCTTGTCCAGAATATGGTTGTCTTGTTTATGAGCACATGTCACGTGGAAGCTTAGATGATGTCCTTTTCTGTAGAGGAAATAGTCCTGCACTTCCATGGCAACTTAGGTTCAAGATTGTGTCTGAGATTGGAACTGGTTTATTATTCCTACACCAAACAAAACCTGAACCTCTAGTCCATAGGGACTTAAAACCAGCAAACATATTGCTTGATAGAAACTATGTTGCAAAGATAAGTGATGTAGGTTTGGCTAGGTTAGTTCCACCTTCTGTTGCTAACAATGTTACTCAATATAGAATGACTTCAGCTGCTGGAACTTTCTGTTATATTGATCCTGAGTATCAACAAACTGGAATGTTGGGTGTGAAATCTGATATTTATTCACTTGGGATCATTTTTCTACAAATTTTGACAGCAAGACCACCAATGGGTTTAACACACCATGTTGAAAGAGCTATTGAGAAGGGTAAATTTGTTGATATGCTTGATTCAAAAGTGTGTGATTGGCCTATAGAGGAAGCATTAACACTTGCTAAGATTGCAATCAAATGTGCTGAGTTAAGGAGAAAAGATAGGCCTGATCTTGGAAAACAAGTTCTACCAGAACTAAACAGGTTAAGAGAACTTGCTGAAAGTAATGATCAAAATTCTCTGTTGAATGGCTTTATTAGTCCTTCAAACCATAGCCAAGTTTCTGTTCAGGATGGAGGTGGTTCTTCACATCCTTCCTCGGGAGAGAGCACATGA	2325	0.394	MWLQKNSSWDKKDGVNGIVAVAIDKDKGSQNALKWAIDHLLTRNNTVVLIHVNAKHASITTPKAKGFGISEHNSLVSKDPDDQTKEIFRPYRVFCARKDLHCKDVVLEDGDVARALIEYTSHTAIEHLVIGSSNKTGFLRFKGSDIPGIISKGAPDFCTIYVVSKGKIQSMRSASRPVPFVSPLLTQLTPTSLNSPDQSDPPRVPLSGGSVKGERRPLEVPPRRSHDGTTDSFRSPFTRKGMAERYVEISTAADSDITFVSSGRSSIDKLFPTLTNNNTSESGFSNPRLSYSSDTDANYSFESLNFGRRSIDITSPDHSFSSDGFSSSSQTTDDVEAEMRRLKLELKQTMEMYSTACKEALSAQHMAVELQRWKIEEEKRMEEARMAEEAALAMAERERAKSKAAIETAEAQKRIAELESQKRLNAEMKALKESEERRRAIDALANKDVRYRRYSIEEIEEATSFFAEALKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMSRGSLDDVLFCRGNSPALPWQLRFKIVSEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVANNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGKFVDMLDSKVCDWPIEEALTLAKIAIKCAELRRKDRPDLGKQVLPELNRLRELAESNDQNSLLNGFISPSNHSQVSVQDGGGSSHPSSGEST*	775

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g1756	774	SMART	serkin_6	466	729	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g1756	774	Gene3D	Phosphorylase Kinase; domain 1	444	538	-	-
	Lan6g1756	774	Coils	Coil	332	352	-	-
	Lan6g1756	774	Pfam	Universal stress protein family	19	141	IPR006016	-
	Lan6g1756	774	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	19	141	-	-
	Lan6g1756	774	Gene3D	HUPs	18	149	IPR014729	-
	Lan6g1756	774	MobiDBLite	consensus disorder prediction	189	236	-	-
	Lan6g1756	774	Coils	Coil	378	438	-	-
	Lan6g1756	774	PANTHER	OS02G0152300 PROTEIN	10	773	-	-
	Lan6g1756	774	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	584	596	IPR008271	GO:0004672\|GO:0006468
	Lan6g1756	774	MobiDBLite	consensus disorder prediction	216	230	-	-
	Lan6g1756	774	Pfam	Protein kinase domain	469	719	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g1756	774	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE	10	773	-	-
	Lan6g1756	774	ProSiteProfiles	Protein kinase domain profile.	466	729	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g1756	774	MobiDBLite	consensus disorder prediction	746	774	-	-
	Lan6g1756	774	CDD	STK_N	18	166	-	-
	Lan6g1756	774	SUPERFAMILY	Protein kinase-like (PK-like)	450	721	IPR011009	-
	Lan6g1756	774	Gene3D	Transferase(Phosphotransferase) domain 1	539	749	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g1756	Lan-Chr6	28799673	28816949	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g1756	1	759	Receptor kinase-like Gene Family	AT1G78940	55.045	0.0	783

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Lan6g1756		Pkinase	4e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g1756	-		-	gmx:100779981	1058.51