Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1754 ATGAGTTACCATCATAGTTTCATTTTCATTGCTACCCTTTTTCTTCTTCTTTTTCTGCAGTTCATATCCACTTCTTGTAATGCTCAACTTCATGTTGATCATTACATAAACACATGTCCACATGTTGCATCAATTGTACGTTCTGCAGTTGAGAAGAAATTTCAGCACACATTTGTTACAGCACCTTCTACACTAAGGCTTTTCTTCCATGATTGTTTTGTCAGGGGATGTGATGCTTCTGTGATACTAGTTTCAAGAAATGGTACTACAGAGAAGGATAATCCTATAAATCTATCACTAGCTGGTGATGGATTTGACACTGTGATTAGAGCAAAAGCTGCAGTTGATAGTGTAGCTGGATGCACAAATAAGGTTTCATGTGCTGATATTTTGGCAATGGCTGCTAGGGATGTCATAGCATTGACAGGAGGACCATCTTATGCAGTAGAGTTGGGAAGGCTAGATGGAAGAATCTCTACAAAAGCTAGTGTTAATAATCATCTACCTCATCCTCAATTCACACTATCAAAGCTCATTCAAATGTTTGCTTCACATGGCCTCAACCTAGTGGATTTAGTTGCTCTATCAGGAGCACATACAATTGGGTTTTCTCACTGCAGCCAATTCTCGAAACGAATTTACAACTTCAGAAGCAGGAACAGGATTGATCCAACACTTAACCTGGCATATGCAAAACAAATCCAGCAAGAGTGTCCGAAAAATGTAGATCCTAGAATGGTCATTGACATGGATCCAGTTACAAATAATGTATTTGATAACAATTACTACAAGAATATCCAACAAGGAAAAGGACTACTTTCTTCTGATCAAGCATTGTTTACTGATAGAAGATCAAGAAGCATAGTGAACTTGTTTGCATCAAACAGCACAGCATTTGAGAAGTCCTTTGTGATTGCCATGACAAAGCTTGGACGAGTCGGGATCAAAACTGGAAAACAAGGCGAAATCAGGCGGGATTGCGCAATGGTTAACTGA 996 0.3896 MSYHHSFIFIATLFLLLFLQFISTSCNAQLHVDHYINTCPHVASIVRSAVEKKFQHTFVTAPSTLRLFFHDCFVRGCDASVILVSRNGTTEKDNPINLSLAGDGFDTVIRAKAAVDSVAGCTNKVSCADILAMAARDVIALTGGPSYAVELGRLDGRISTKASVNNHLPHPQFTLSKLIQMFASHGLNLVDLVALSGAHTIGFSHCSQFSKRIYNFRSRNRIDPTLNLAYAKQIQQECPKNVDPRMVIDMDPVTNNVFDNNYYKNIQQGKGLLSSDQALFTDRRSRSIVNLFASNSTAFEKSFVIAMTKLGRVGIKTGKQGEIRRDCAMVN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1754 331 PANTHER - 11 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 Gene3D Peroxidase, domain 2 169 310 - -
Lan6g1754 331 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Lan6g1754 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Lan6g1754 331 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 Gene3D - 33 331 - -
Lan6g1754 331 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 ProSiteProfiles Plant heme peroxidase family profile. 29 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 CDD secretory_peroxidase 29 330 IPR033905 GO:0004601|GO:0042744
Lan6g1754 331 Pfam Peroxidase 46 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan6g1754 331 PANTHER PEROXIDASE 11 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1754 Lan-Chr6 28785935 28788207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1754 1 331 Peroxidase AT2G18980 60.725 7.61e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1754 K00430 - gmx:100793327 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1092 10 16087633 16089863 Lan6g1754 6 28785935 28788207 LSH
Lan6g1754 6 28785935 28788207 Lan3g1648 3 28719847 28722153 LSH