Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1753 ATGCTTGATCAGAAGAAAGTAGTCCTTTTCCTTGTTACCCTTAATAAGTTAAGTGTTGATAGAAACTTGATTGAGGTGTTTGCTAAGGGTGTTGAGAAGGAGTATGTTATTCTTCTCGCGGCAAGGGCTTCTAGGACTGAAAATCAAGATGCCATAGATGCTGCAATAGTTGGAATGCTTGCGGACCCAAAGGAGGCACGAGCTGGAATTCGGGAGGTGCATTTCCTTCCATTCAATCCAGTAGACAAGAGGACTGCTCTAACTTACATTGATTCTAATGGAAATTGGCATCGAGCTAGCAAAGGAGCTCCCGAGCAGATAATTGAACTTTGTAACTGCAAAGAAGATGTGAGGAAAAGAGTTCATTCAGTAATTGATAAGTTTGCTGAGCGCGGACTTCGTTCTTTAGGTGTTGCAAGACAGGAAGTACCGGAGAAAACAAAAGATAGTCCTGGTGCACCATGGCAATTTGTTGGTCTGCTACCACTGTTTGATCCTCCAAGGCATGACAGCGCCGAGACCATCAGAAGAGCTCTTAATCTTGGAGTGAATGTTAAGATGATTACAGGTGATCAGCTTGCCATCGGAAAGGAAACAGGCCGAAGACTTGGAATGGGAACGAACATGTATCCTTCATCTTCGTTGCTCGGCCAAGACAAAGATTCTTCTATTTCGGCTCTTCCAGTTGATGAGTTGATAGAAAAGGCTGATGGATTTGCCGGAGTATTTCCTGAACACAAATATGAAATCGTTAAGAGGCTTCAAGAGAGGAAGCATATATGTGGAATGACGGGAGACGGTGTGAACGATGCCCCTGCATTGAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACAGAACCCGGTTTAAGTGTTATTATTAGTGCAGTGCTCACTAGCAGAGCAATCTTCCAGAGAATGAAGAACTACACTATTTATGCCGTGTCAATCACCATTCGTATTGTGTTTGGTTTCATGTTTATTGCCTTGATCTGGAAGTTTGATTTTGCACCATTCATGGTTTTGATTATTGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCATTGCCAGATAGCTGGAAACTGAGGGAGATATTTGCTACCGGCGTTGTTCTGGGAACTTACATGGCACTCATGACAGTCGTATTTTTCTGGGCAATGAAAGATACCAACTTCTTCCCAGACATGTTTGGTGTGAGGACTATAAGATATAACCCTGATGAGATGATGGCAGCCTTATACCTACAAGTCAGTATTATAAGCCAAGCACTAATCTTCGTGACAAGGTCTCGAAGCTGGTCCTTTGCCGAAAGACCTGGTCTCCTCCTACTAGGTGCTTTTTTTATTGCTCAGCTGGTGGCAACTTTTATAGCAGTATATGCTAATTGGGGGTTTGCAAGAATAAAAGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGCTATACAGTTTAGTGACATATGTCCCTCTCGATTTACTCAAATTCGCGATCCGCTATATTCTCAGTGGAAAAGCTTGGGATAATCTTTTGGAGAACAAGACTGCTTTCACTACGAAGAAAGACTACGGCAAAGAAGAGAGAGAAGCGCAATGGGCTGCTGCACAGAGAACACTTCATGGCCTTCAGCCGCCGGAAACCTCCAACCTTTTCAATGAGAAGAATAGCTATAGGGAACTTTCAGAGATTGCAGAGCAAGCAAAGAGGCGCGCTGAGGTTGCAAGGCTTAGGGAGCTTCATACTCTGAAAGGACATGTTGAGTCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTCAGCAACACTACACAGTTTAA 1884 0.4342 MLDQKKVVLFLVTLNKLSVDRNLIEVFAKGVEKEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGNWHRASKGAPEQIIELCNCKEDVRKRVHSVIDKFAERGLRSLGVARQEVPEKTKDSPGAPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDSSISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGTYMALMTVVFFWAMKDTNFFPDMFGVRTIRYNPDEMMAALYLQVSIISQALIFVTRSRSWSFAERPGLLLLGAFFIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLYSLVTYVPLDLLKFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1753 627 Gene3D - 576 627 - -
Lan6g1753 627 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 12 482 IPR006534 GO:0008553|GO:0016021|GO:0120029
Lan6g1753 627 Pfam haloacid dehalogenase-like hydrolase 94 278 - -
Lan6g1753 627 Gene3D - 265 522 - -
Lan6g1753 627 PANTHER CALCIUM-TRANSPORTING ATPASE 12 607 - -
Lan6g1753 627 PRINTS H+-transporting ATPase (proton pump) signature 121 139 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g1753 627 PRINTS H+-transporting ATPase (proton pump) signature 236 252 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g1753 627 PRINTS H+-transporting ATPase (proton pump) signature 264 280 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g1753 627 PRINTS H+-transporting ATPase (proton pump) signature 295 320 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g1753 627 PRINTS H+-transporting ATPase (proton pump) signature 436 457 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g1753 627 Coils Coil 578 598 - -
Lan6g1753 627 SUPERFAMILY HAD-like 89 311 IPR036412 -
Lan6g1753 627 PRINTS P-type cation-transporting ATPase superfamily signature 159 170 - -
Lan6g1753 627 PRINTS P-type cation-transporting ATPase superfamily signature 181 191 - -
Lan6g1753 627 PRINTS P-type cation-transporting ATPase superfamily signature 264 283 - -
Lan6g1753 627 PRINTS P-type cation-transporting ATPase superfamily signature 287 299 - -
Lan6g1753 627 Gene3D - 17 164 IPR023299 GO:0000166
Lan6g1753 627 PANTHER PLASMA MEMBRANE ATPASE 12 607 - -
Lan6g1753 627 SUPERFAMILY Calcium ATPase, transmembrane domain M 313 523 IPR023298 -
Lan6g1753 627 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 239 354 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1753 Lan-Chr6 28781452 28785592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1753 12 627 Primary Pumps ATPases AT2G24520 87.987 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1753 K01535 - gmx:100791692 1157.51