Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1735 ATGGATGGTGATCGGAAAATCCCCGATCCATCTGATCATCCCATAGATGGTGCTCAGAAAGTTAGGTCATTGCACGGGAGGACTACTGGCCCTACAAGGCGTTCTACAAAGGGGCAATGGACGTCCGAGGAGGATGACATTTTGAGGAAGGCTGTTCAGCGATTTAAAGGAAAGAATTGGAAAAAAATAGCCGAGTGTTTCACCAATAGAACTGATGTGCAATGCCTACATAGGTGGCAGAAAGTTTTAAATCCTGAGCTTATCAAAGGTCCATGGTCTAAAGAGGAAGATGAAGTAATTATTGAATTGGTGAACAAATATGGCCCTAAAAAATGGTCTACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCGGCTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTAGCTCTAATACATGCTCATCAGATTTATGGGAACAAATGGGCGGAATTAACGAAGTTCTTGCCTGGAAGGACAGACAATGCTATTAAGAATCACTGGCACAGTTCTGTAAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTAATCAATTCCAACCTGTAAATCATGTGGGAAATTCAAATCAATCGATGGCTATAGCCTCTTCGAGCTTGCAGTGTGGAGATGATAATGATTCAAAGCAGACAGAAGGAGAAGAAGTTTCGGAGTGTAGCGAGTCAGCTAATGCTGGTCATTTCCCATCAGCAAGAGAGATGAGCAATGCTGGCTTACAAACTAGAGAGTATTACAGAGCAAATGAAGATTCTAGTCATGGAAAGGATCATAGTTCATGTCAAGCATACTGTTCAGAGCCATATTATGTGTCCCTTGATGATGTTACTATATGCGATCCAGACATTACTCACGAAGACGTTCACGCTTCTCGATTTAATTTTAATTCCTTCCCCAATATCTCATCAGAGGGCTTGGTGCAGGAATCCTCGAAATTGCAAAGCAACTGTGTAGCTCCTAGTGAAATCTGCGACTATGTTCCATTTCAAACTTCAGGGAGGTTAGGTGTTTCTACATCCACTGGACCTACTTCTACAGATTCTGTTAGACCAGAGCGCATGTTGATACCTGATGATGAATGTGGCAGAGTCCTTTTCTCAGAGGCAGGGAACGATGCAAAGTTTTGCTCCGGAGACCAGGGTGTAGATTTTGTCGACTTTTCTGGCTATACTTCATTTCTTTCTCAGTCATGTGATATCCATATGTCTGAAACTGGTGGAACTTCAACTTCACAGCAAAGTTGTCCTCCGTGTTCTAATACTTTTAATACTTCATCCTCTCAATCTGTGCCACCAATACTTTCTTCTAGTGGCCGCTGTCTGATTTTTACTGCCAATGATAATCAATTATTTGAGCCTGAGGATCAGCAGATTGTTTCTGGTACACCTGATAATTTCATTTATGGCAATGACATGTCCAGTTCTCCTTGTGTTGATGGTATAGATAGTGCAGTAATGCAAGAGCCACCAGATATCGTCAAGGATACTTCAAAGTTGGTCCCTGTAAATAGGGTTGGCTGCGCATCGGGCTCTATGCCAACTTGTTATCCGACAGATGAAAAGCCAACCACACATATAAAAAAGGAGGGTGCAGGAGCTCTATGTTATGAACCTCCTCGTTTTCCAAGCTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAACCTGGAGCTGATATGCTGCAAGAATATAGTCCCCTTGGTATCCGCCAGTTTATGATGTCATCAATGAACTGTCTAACGCCTTTCAGGTTGTGGAGCTCACCCTCTCGTGATGATAGTCCAGATGCATTGTTGAGAAGTGCAGCCAAAACTTTCACGGGCACACCATCCATATTAAAGAAACGTCGCCGTTGTCTGCTGTCACCACTGTCAAATAAAAGAATTGGCAAGAAACTTGACACTGACATGGCAGCCACGCTGACCAAAAAGTTTCCCAGCGTGGAAGGCATCTTTAATGCTAGTGTGTCAGTTGCTGGTGATAAAGAAAATTGTGGACCAGCCTTCAACGGGGACCAAGAGGGGGAGAAAATGAAATCTACATTTTTGGACAAAATGAGTTCAGAAAAAGATACCGTTGACAGTAATTCTCGGGATAAAGTTAAGCAGCGACCTCTTGATATTGATGCTAAAATGAAGACCGTTGTTGATGCTGCTGTTGATATCGTGCAACAACCTTGTGGAGTTTTGGTTGAACGTGATATAAATGACCGGTTGTTGTTCTCTCCTAGAACTCCCAAGAAATTGGACAATAAGAGTTTGGAAGAAGCTCCGAATCAGAGCATCCCTTTGAAATTAGCATCTGAAAATCCATGCTCAAGTGTTAACTCTCCTTGTGTTCATGCAAAGGAGCATGAAAGACTTTCAGTTGTTGTTACCTGTGTACCATCTGTCTGTTCATCAACCCCAGGGGAGAATTCCGGGTATCAAACCAGAAACGATGGTGGTTTTGAAACTAGTAACATATTTGGTTCAACACCATTCAGGAAAAGCCTTGAATCACCTTCTGCATGGAAATCTCCTTGGCTCTTCAACACTTTTATGTCCAGCCCCAGATTTGATACCGAAATTACAATCGAGGATTTTGGGTTTTTAATGAGCCCGGGTGATAGAAGCTATGATGCAATCGGGTTGATGAAACAAGTCGGTGAACAAAATGCTGCCACATATGCCAATGCTCAGGAGATTTTGGGAGATGAAACTCCTAAGGTGTTGAAGAAAGAGACATCCGGAAACAAGGATGGGAACCATGAAAAGGCTGGGAAAATTTCTCAATTGGGTTCAAATTCTTTGATGGAGCGACGGATACTCGACTTTAGTGAATGTGGAACACCAGGCAAGGGTGATAACAGCAAATCCTCCTCAGCTATGAACTTCTCAAGCCCTACTTCATACTTGCTGAAAGGTTGCAGATAG 2979 0.426 MDGDRKIPDPSDHPIDGAQKVRSLHGRTTGPTRRSTKGQWTSEEDDILRKAVQRFKGKNWKKIAECFTNRTDVQCLHRWQKVLNPELIKGPWSKEEDEVIIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIHAHQIYGNKWAELTKFLPGRTDNAIKNHWHSSVKKKLDSYLASGLLNQFQPVNHVGNSNQSMAIASSSLQCGDDNDSKQTEGEEVSECSESANAGHFPSAREMSNAGLQTREYYRANEDSSHGKDHSSCQAYCSEPYYVSLDDVTICDPDITHEDVHASRFNFNSFPNISSEGLVQESSKLQSNCVAPSEICDYVPFQTSGRLGVSTSTGPTSTDSVRPERMLIPDDECGRVLFSEAGNDAKFCSGDQGVDFVDFSGYTSFLSQSCDIHMSETGGTSTSQQSCPPCSNTFNTSSSQSVPPILSSSGRCLIFTANDNQLFEPEDQQIVSGTPDNFIYGNDMSSSPCVDGIDSAVMQEPPDIVKDTSKLVPVNRVGCASGSMPTCYPTDEKPTTHIKKEGAGALCYEPPRFPSLDIPFFSCDLVQPGADMLQEYSPLGIRQFMMSSMNCLTPFRLWSSPSRDDSPDALLRSAAKTFTGTPSILKKRRRCLLSPLSNKRIGKKLDTDMAATLTKKFPSVEGIFNASVSVAGDKENCGPAFNGDQEGEKMKSTFLDKMSSEKDTVDSNSRDKVKQRPLDIDAKMKTVVDAAVDIVQQPCGVLVERDINDRLLFSPRTPKKLDNKSLEEAPNQSIPLKLASENPCSSVNSPCVHAKEHERLSVVVTCVPSVCSSTPGENSGYQTRNDGGFETSNIFGSTPFRKSLESPSAWKSPWLFNTFMSSPRFDTEITIEDFGFLMSPGDRSYDAIGLMKQVGEQNAATYANAQEILGDETPKVLKKETSGNKDGNHEKAGKISQLGSNSLMERRILDFSECGTPGKGDNSKSSSAMNFSSPTSYLLKGCR* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1735 992 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Lan6g1735 992 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Lan6g1735 992 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Lan6g1735 992 MobiDBLite consensus disorder prediction 1 20 - -
Lan6g1735 992 Gene3D - 36 86 - -
Lan6g1735 992 MobiDBLite consensus disorder prediction 1 42 - -
Lan6g1735 992 MobiDBLite consensus disorder prediction 221 254 - -
Lan6g1735 992 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Lan6g1735 992 SUPERFAMILY Homeodomain-like 35 97 IPR009057 -
Lan6g1735 992 MobiDBLite consensus disorder prediction 960 992 - -
Lan6g1735 992 CDD SANT 40 83 IPR001005 -
Lan6g1735 992 Gene3D - 142 207 - -
Lan6g1735 992 PANTHER TRANSCRIPTION REPRESSOR MYB5 5 991 - -
Lan6g1735 992 MobiDBLite consensus disorder prediction 967 986 - -
Lan6g1735 992 Gene3D - 88 140 - -
Lan6g1735 992 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Lan6g1735 992 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Lan6g1735 992 CDD SANT 143 183 IPR001005 -
Lan6g1735 992 PANTHER MYB PROTEIN-RELATED 5 991 - -
Lan6g1735 992 SMART sant 88 137 IPR001005 -
Lan6g1735 992 SMART sant 140 188 IPR001005 -
Lan6g1735 992 SMART sant 36 85 IPR001005 -
Lan6g1735 992 CDD SANT 91 135 IPR001005 -
Lan6g1735 992 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Lan6g1735 992 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Lan6g1735 992 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Lan6g1735 992 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1735 Lan-Chr6 28591145 28598390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1735 14 992 MYB Transcription Factor Family AT4G32730 42.968 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan6g1735 Myb_DNA-binding 8.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1735 - K09420 aprc:113848458 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1003 10 15275554 15283487 Lan6g1735 6 28591145 28598390 LSH
Lan6g1735 6 28591145 28598390 Lan14g0750 14 14472927 14480371 PCT
Lan6g1735 6 28591145 28598390 Lan3g1503 3 26548931 26555869 PCT
Lan14g0750 14 14472927 14480371 Lan6g1735 6 28591145 28598390 PCT
Lan3g1503 3 26548931 26555869 Lan6g1735 6 28591145 28598390 PCT