Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1723 ATGAATTCGGATCCAAGTTCACGTTATGTTCGGTATGATGAGATGTTGGGGAAAGGAGCATTCAAGACTGTATATAGGGCATTTGATGAAGTAAACGGAATAGAGGTTGCCTGGAATCACATCAGTATTGAGGATGTTTTGCAGTCACCACAGCAGTTGGAAAGATTATATTCCGAGGTCCATATCCTCAAGTCATTGAAGCATGAAAATATTATTAAGCTTTATAATTCTTGGGTAGATGATAAGAACAAGACTATCAACATGATTACCGAGTTATTCACCTCTGGGAGTTTGAGGCAGTACCGGAAGAAACATAAGAATGTTGATATGAAAGCCATCAAGAATTGGGCGAGGCAGATTCTTCGAGGCTTATGCTATCTGCATAGCCGCAGTCCTCCGATAATTCATAGGGATCTTAAATGTGATAATATTTTCGTTAATGGCAATGATGGCCATGTTAAGATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCTACTGCCCAGAGTGTTATTGGTACACCAGAGTTCATGGCCCCAGAGCTATATGATGAAGAATATAATGAACTTGTTGATATATATTCCTTTGGCATGTGTATGCTGGAAATGATCACCTGTGAGTACCCATACAGTGAATGCAAAAATCCGGCCCAAATATATAAGAAAGTTACCTCTGGCATAAAGCCTGCTGCTCTTTCCAAAGTAAATGATCCGGAAATGAAGCGATTTATTGAGAAGTGTCTAGTTCCAGCTTCTATGAGATTGCCTGCTTCTGAACTATTGAAAGACCCATTCCTTGCAACTGAAAACACAAAGGAGATCAATCATGATATGCTACACCTGCCTGATCCCTTTGCCAAGATGGTGAATCCACCAATATCCGAGCCTTATCCCATGGAGATAGACTCGAACTTCAGGCATACTTCATCTAGCTCCTCTGTTAGAAGAATTGAAGAAGCTTCTCAAGTTTCAACTTTTGATCTAGTTAGGATGACTGAGAATAACGAATTTAGGTTAAGAGGAGATAAAGATGGTGAAAGTACAATTTCGCTTATGCTGCGAATTGCAGATACACATGGTGAGTATTTTCAGATATCTTTTCTTTTTTACTGTATGCTAATACACATGTTAATATATTTGTGTAGGCCGAGCAAGGAATATCCATTTTCCATTTTTTATTGA 1185 0.3916 MNSDPSSRYVRYDEMLGKGAFKTVYRAFDEVNGIEVAWNHISIEDVLQSPQQLERLYSEVHILKSLKHENIIKLYNSWVDDKNKTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCYLHSRSPPIIHRDLKCDNIFVNGNDGHVKIGDLGLAIVMQQPTAQSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYSECKNPAQIYKKVTSGIKPAALSKVNDPEMKRFIEKCLVPASMRLPASELLKDPFLATENTKEINHDMLHLPDPFAKMVNPPISEPYPMEIDSNFRHTSSSSSVRRIEEASQVSTFDLVRMTENNEFRLRGDKDGESTISLMLRIADTHGEYFQISFLFYCMLIHMLIYLCRPSKEYPFSIFY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1723 394 SUPERFAMILY Protein kinase-like (PK-like) 13 317 IPR011009 -
Lan6g1723 394 ProSiteProfiles Protein kinase domain profile. 10 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1723 394 SMART serkin_6 10 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1723 394 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Lan6g1723 394 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1723 394 PANTHER WNK KINASE 3 371 - -
Lan6g1723 394 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Lan6g1723 394 CDD STKc_WNK 8 267 - -
Lan6g1723 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lan6g1723 394 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1723 Lan-Chr6 28476723 28483800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1723 4 371 MAP Kinase Kinase Kinase AT5G41990 67.663 9.81e-173 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan6g1723 Pkinase 5.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1723 K08867 - gmx:100783717 618.616