Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1719 ATGTTGCAGTTGAGAATGTCTACATTATTGATATTTTTCTCGGTCTCTCTCTTCCTCTTTTCTCGATCGCAGTCGGCAGTTTTCACAGTCGATCTAGGCTCTGAATCGCTCAAAGTCGCCGTCGTTAACCTAAAACCCGGCCAGATCCCAATCTCCATCGCGATCAATGAAATGTCGAAGCGTAAATCACCGGCACTCGTTTCATTCAACTCCGGCGACCGGCTCCTCGCCGAAGAAGCCGCCGGCCTCGTCGCTCGCTATCCTCAAAACGTTTTCTCTCACATCAGAGACCTCATCGGAAAACCCTACGATTTCGCAACGCGATTTCTCGACTCAATGTACTTGCCATTCGAGGTTAAACAAGATTCCAGAGGAGCGGTTAGTTTCAAAGTTGATAGTGAAAACGGCACCGTTTATTATTCACCTGAGGAATTGGTTGCTATGGTTTTGAGTTACGCAGTGAATTTAGCCGAGTTTCATTCTAAGGTTCCGATCAAAGACGCGGTGCTCACGGTGCCGCCGTATTTCGGGCAATCGGAACGAAAAGGGATTATTCAGGCGGCGAAATTGGCAGGGATTAATGTGCTTTCGTTGATTAACGAACATTCCGGTGCAGCATTGCAGTATGGGATTGATAAGGATTTTTGGAATGAGACAAGGCATGTTGTATTCTATGACATGGGTGCAGGGACTACTTATGCTGCACTTGTGTATTTCTCAGCTTATCAAAGTAAGGAGCATGGGAAACCTGTGTGGATTAATCAGTTTCAGGTTAAGGATGTTCGTTGGAACCCAGAGTTGGGTGGTCAGAATATGGAATTGCGATTGGTGGAGTATTTTGCTGATGAGTTCAATGCCCAAGTCGGTAATGGAATAGATATAAGGAAATTTCCCAAGGCTATGGCTAAATTGAAGAAACAGGTTAAACGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCCATTTCAGTTGAATCGCTTCATGGTGATATAGACTTCAGGAGCACAATAACCCGCGAGAAGTTTGAAGAGCTTTGTGAAGATATTTGGGAAAAATCTCTTTTACCTGTGAAAGAGGTGATTGAGAATTCAGGCCTGTCAGTGGACCAAATATATGCAGTAGAGTTAATTGGAGGTGCTACCAGAGTTCCAAAACTACAGGCTAAGCTTCAAGAGTTCATTGGGAGAAAAGAACTTGATAGGCATCTTGATGCCGATGAAGCTATAGTTCTTGGTGCATCTCTGCATGCTGCAAATATAAGTGATGGAATCAAATTGAACCGCAAACTTGGAATGGTTGATGGTTCCTTGTATGGGTTTGTGTATGAGTTGAATGGTCCTGATATTGTGAAAGATGAAAGCTCTAAGCAGTTACTTGTACCTCGAATGAAGAAACTACCTAGTAAGATGTTCAGATCCATTAATCATAACAAAGATTTTGAAGTATCACTTGCTTATGAAAGTGAAAATCAATTGCCTCCTGGTGTTGCATCTCCTCAAATTGCTCAATACCAGATATCTGGTTTGACAAATGCAAGTGAAAAGTACTCATCTCGGAACCTGTCATCCCCCATCAAGGCAAATATACATTTCTCCCTTAGTAGGAGTGGAGTTCTTTCTCTGGATCGGGCAGATGCTGTTGTTGAAACAATGGAGTGGGTGGAAGTTCCTAAAAAGAATTTGACCATAGAGAATTCAATAATTTCATCAAACTCATCAAATGAAGCTGGTGCTACGAATAGTTCTGAGGAAAGCAATGAAAACTTGCAAACTGATAGTGGGACTAGTGACACACCTAACAATAGTACGGAGGAGCAAGCTGCCACAGAACCTTTGACAGAGAGAAAGCTAAAAAAGAGGACCTTTAGGGTTCCATTAAAGATTGTTGAGAAGATAACTGGACCTGGAGTGTCTCTATCAAATGAGTTTCTTGCTGAAGCTAAAGGCAAATTAGAAGCACTAGACAAAAAAGATGCAGAAAGGAAAAGAACAGCAGAGTTAAAAAATGATTTAGAAGGATATATTTATACTACTAAGGAAAAGATTGAAACTCTTGAGGAGTTCGAAAAGGTTTCTACCGCTGAGGAACGCCAGTCTTTTGTTGAGAAGCTTGATCAGGTACAAGACTGGTTGTATATGGATGGTGAAGATGCCAATGCTGATGAGTTTCAAGAACGCCTAGATACATTAAAAGCTGTTGGTGATCCAATTTTCTTTAGGTTAAAAGAGCTCACAGCTCGTCCAGTGGCAGTTGAGCTTACCCATAAATACCTTGATGAGCTGAAACAGATTGTAGAAGAGTGGAAAGCAAACAAGTCTTGGATTCCAAAAGAACGAGTAGATGAGGTAGTTGATGATGCTAAAAAGTTAAAGGGATGGTTGGATGAGAAAGAAACTGAGCAAAAAAAGACATCCGAATTCAGCACACCAGTATTTACTTCTGAAGAAGTATATCTAAAGGTGTTTGACCTGAAAAACAAGGTTGCTAGTTGTAATCGAATTCCCAAGCCCAAGCCAAAAGTTCAGAAGCCTACAAAGAACGAAACTAAGAGCAGTGAGCAGAAAACTGATAATTCTAGTTCCTCCTCGAATGATAGCTCCTCTCCAAGTGATCAATCCACGAACGATTCAAACAGTTCAAGTGATGAAACAGTTGACAAGCAACCCGAAACTCGTGATGAGTTATGA 2691 0.4158 MLQLRMSTLLIFFSVSLFLFSRSQSAVFTVDLGSESLKVAVVNLKPGQIPISIAINEMSKRKSPALVSFNSGDRLLAEEAAGLVARYPQNVFSHIRDLIGKPYDFATRFLDSMYLPFEVKQDSRGAVSFKVDSENGTVYYSPEELVAMVLSYAVNLAEFHSKVPIKDAVLTVPPYFGQSERKGIIQAAKLAGINVLSLINEHSGAALQYGIDKDFWNETRHVVFYDMGAGTTYAALVYFSAYQSKEHGKPVWINQFQVKDVRWNPELGGQNMELRLVEYFADEFNAQVGNGIDIRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDIDFRSTITREKFEELCEDIWEKSLLPVKEVIENSGLSVDQIYAVELIGGATRVPKLQAKLQEFIGRKELDRHLDADEAIVLGASLHAANISDGIKLNRKLGMVDGSLYGFVYELNGPDIVKDESSKQLLVPRMKKLPSKMFRSINHNKDFEVSLAYESENQLPPGVASPQIAQYQISGLTNASEKYSSRNLSSPIKANIHFSLSRSGVLSLDRADAVVETMEWVEVPKKNLTIENSIISSNSSNEAGATNSSEESNENLQTDSGTSDTPNNSTEEQAATEPLTERKLKKRTFRVPLKIVEKITGPGVSLSNEFLAEAKGKLEALDKKDAERKRTAELKNDLEGYIYTTKEKIETLEEFEKVSTAEERQSFVEKLDQVQDWLYMDGEDANADEFQERLDTLKAVGDPIFFRLKELTARPVAVELTHKYLDELKQIVEEWKANKSWIPKERVDEVVDDAKKLKGWLDEKETEQKKTSEFSTPVFTSEEVYLKVFDLKNKVASCNRIPKPKPKVQKPTKNETKSSEQKTDNSSSSSNDSSSPSDQSTNDSNSSSDETVDKQPETRDEL* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1719 896 Gene3D - 30 419 - -
Lan6g1719 896 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 429 572 IPR029047 -
Lan6g1719 896 SUPERFAMILY Actin-like ATPase domain 220 420 IPR043129 -
Lan6g1719 896 Gene3D - 640 752 IPR029048 -
Lan6g1719 896 SUPERFAMILY Actin-like ATPase domain 30 213 IPR043129 -
Lan6g1719 896 MobiDBLite consensus disorder prediction 855 883 - -
Lan6g1719 896 PRINTS 70kDa heat shock protein signature 58 70 - -
Lan6g1719 896 PRINTS 70kDa heat shock protein signature 168 188 - -
Lan6g1719 896 PRINTS 70kDa heat shock protein signature 372 388 - -
Lan6g1719 896 PRINTS 70kDa heat shock protein signature 404 424 - -
Lan6g1719 896 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 24 831 - -
Lan6g1719 896 CDD HYOU1-like_NBD 30 419 - -
Lan6g1719 896 Gene3D - 93 148 - -
Lan6g1719 896 ProSitePatterns Heat shock hsp70 proteins family signature 3. 375 389 IPR018181 -
Lan6g1719 896 MobiDBLite consensus disorder prediction 832 896 - -
Lan6g1719 896 Gene3D - 214 401 - -
Lan6g1719 896 PANTHER HSC70CB, ISOFORM G-RELATED 24 831 - -
Lan6g1719 896 MobiDBLite consensus disorder prediction 572 609 - -
Lan6g1719 896 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 667 748 IPR029048 -
Lan6g1719 896 Gene3D Actin; Chain A, domain 4 268 353 - -
Lan6g1719 896 MobiDBLite consensus disorder prediction 572 616 - -
Lan6g1719 896 Pfam Hsp70 protein 28 740 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1719 Lan-Chr6 28412602 28422325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1719 19 535 Calmodulin-binding Proteins AT3G12580 28.977 5.91e-61 217