Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1717 ATGGCCTCTTCAAGCTACTCCAATTCTCCTTGTGCTGCATGCAAGTTCTTAAGAAGGAAATGCATGCCAGATTGCATATTTGCACAATACTTCCCACCAGAAGAGCCTCAAAAGTTTGCAAATGTTCATAAAATATTTGGTGCAAGCAATGTAAGCAAGCTTCTGAATGAAGTTCAACCTCATCAAAGAGAAGATGCAGTGAACTCTCTTGCTTATGAAGCCGAAGCTCGAATCAAAGACCCTGTCTATGGCTGTGTTGGTGCCATTTCAGTGCTACAAAGACAAGTGATTAGGCTTCAAAAGGAGCTAGATGCAACAAATGCTGATTTGATTCGTTATACTTGTAATGAAATTCCAAATAATACTGAAGATGGTAGAAGAATTGGTGAAGGTGGAGAAGGTTCTTCTTCTTCTCTTAATCAATCTCTTTCAGGGTTTTATTATCCTTCTTCTCCTTGGAATAATGATCCTTGTGGTGACGCTTATCAGAGAGGAAGTAACAACAATATGTGA 513 0.3918 MASSSYSNSPCAACKFLRRKCMPDCIFAQYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEIPNNTEDGRRIGEGGEGSSSSLNQSLSGFYYPSSPWNNDPCGDAYQRGSNNNM* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1717 170 Coils Coil 89 109 - -
Lan6g1717 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 157 - -
Lan6g1717 170 MobiDBLite consensus disorder prediction 121 141 - -
Lan6g1717 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 1 157 - -
Lan6g1717 170 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lan6g1717 170 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1717 Lan-Chr6 28373478 28375919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1717 4 113 AS2 family AT3G27650 84.545 1.30e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan6g1717 LOB 4.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1717 - - var:108328620 278.1