Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1709 ATGCCGGAGGAAACGACGTCGATCGACTATGTCATGGAGGCTGCTTCCGGTCCTCACTTCTCCGGCCTCCGTCTTGACGGCCTCCTCTCATCTCCACCTTCTTCTCCTGCTCATCATTTCTCTTCTTCTTCTCTTTCCCATCATTCTCTTCCAATTCAACCCTTCATCATAGGAGTTTCGGGAGGTACTGCTTCGGGAAAGACTACAGTATGCGATATGATCATTCAGCAACTCCATGATCACCGCGTTATACTCGTTAATCAGGATTCGTTTTATCGTGGTTTAACTCCTGATGAATTGAAGCGTGTTCACGAGTACAATTTTGATCATCCTGATGCTTTTGACACTGAGCAGATGCTAGAGTGTGTGGGAAAGCTGATAAGCGGCCAAAGCGTCCAAGTCCCTGTTTATGACTTTAAGATTCATCAGCGATCTTCTGAAAATTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGACCAAGAAGTACGGGATCTGATGAACATGAAGATCTTTGTTGATGCAGATGCTGATGTGAGGCTTGCCCGTAGGATTAGACGTGACACAGTGGAGAGGGGCAGGGATATTAACTCTGTTCTTGAACAGTATGCAAAGTTTGTTAAGCCAGCCTTTGATGATTTTGTTTTACCATCAAAGAAGTATGCTGATGTGATCATTCCTCGAGGAGGTGATAATCATGTTGCTATTGATTTGATTGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAACATTTTTGTTATTCAGTCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACCAAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTTATACGACTGGTTGTTGAGCATGGCCTAGGTCATCTCCCATTCACTGAAAAGCAAGTGGTTACTCCAACAGGGTCTGTCTATTCTGGTGTTGATTTCTGCAAGAAATTGTGTGGCGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTCCGTACATGTTGTAAAGGCATTAAAATTGGAAAGATTCTGATTCATCGGGATGGAGACAATGGGAAACAGCTTATATATGAGAAGCTTCCGAAGGATATTTCAGAACGGCACGTCTTGCTTCTTGACCCTGTCCTTGCTACAGGTAACTCTGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCAGAATCCCACATTATATTCCTGAATCTCATTTCTGCTCCAGAGGGAATTCATTGTGTCTGTAAAAGGTTTCCCTCATTGAAAATTGTCACATCTGAGATTGATGTCGCATTAAACGAAGAGTATCGTGTTATCCCGGGATTGGGCGAGTTTGGTGATCGCTACTTCGGCACTGATGATTGA 1428 0.4272 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSPAHHFSSSSLSHHSLPIQPFIIGVSGGTASGKTTVCDMIIQQLHDHRVILVNQDSFYRGLTPDELKRVHEYNFDHPDAFDTEQMLECVGKLISGQSVQVPVYDFKIHQRSSENFRQVNASDVIILEGILVFHDQEVRDLMNMKIFVDADADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNIFVIQSTFQIRGMHTLIRDQDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSIVRSGESMENALRTCCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEYRVIPGLGEFGDRYFGTDD* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1709 475 Gene3D - 258 473 IPR029057 -
Lan6g1709 475 Pfam Phosphoribulokinase / Uridine kinase family 56 242 IPR006083 GO:0005524|GO:0016301
Lan6g1709 475 PANTHER URIDINE KINASE 16 472 - -
Lan6g1709 475 Pfam Uracil phosphoribosyltransferase 272 473 - -
Lan6g1709 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 247 IPR027417 -
Lan6g1709 475 Gene3D - 52 257 IPR027417 -
Lan6g1709 475 CDD UMPK 56 254 IPR000764 -
Lan6g1709 475 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 16 472 IPR029930 GO:0004849|GO:0044206
Lan6g1709 475 PRINTS Uridine kinase signature 54 71 - -
Lan6g1709 475 PRINTS Uridine kinase signature 84 95 - -
Lan6g1709 475 PRINTS Uridine kinase signature 129 144 - -
Lan6g1709 475 PRINTS Uridine kinase signature 186 196 - -
Lan6g1709 475 PRINTS Uridine kinase signature 200 211 - -
Lan6g1709 475 PRINTS Uridine kinase signature 222 235 - -
Lan6g1709 475 TIGRFAM udk: uridine kinase 55 254 IPR000764 -
Lan6g1709 475 CDD PRTases_typeI 331 446 IPR000836 -
Lan6g1709 475 SUPERFAMILY PRTase-like 257 474 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1709 Lan-Chr6 28224571 28233097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1709 1 475 PRT Gene Family AT5G40870 84.679 0.0 832