Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1667 ATGGGAAGCATGAAGGTTCATCAATTCACACGTGGAGGATTCTGGGAGCACGAACCCCTCTCTCTCACACTTGGTTGCAAGCGCTTACGCCCTCTTGCTCCCAAACTTTCCAACTCCAACATCACTACTACTACTTCTACTCCTTTTGATCTCAAGAGCTTTATCAAACCTGAAAGTGGATCCACAAAACTTGGATCCTCATATGAAGATAATAAGAAAGATCCACCTTCACCAAAGGACCAGGTGGAAACGCATCCAGGAGGGACAAGGTGGAATCCAACGCAAGAACAGATAAGGATATTGGAGATGCTGTATAGAGGAGGAATGCGAACTCCAAATACTCAGAAGATAGAGCAAATCACTGTCCAGCTTAGCAAGTACGGCAAGATTGAAGGGAAAAATGTATTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAACGCAAAAGTCTTGGCCTTCCTCTTAGTCCTCGCAGTCCCACCTTTACCAGTAGTATTACTTTTGAGACTACAATGGGGGAAGTAGATCAGGAAGATAGTCCATACAAGAAGTGTAGAAGCATTGCATTTCAGCACTTAGAAGAACAAAACTGGTTATCCTGCAAAGAGGAGGAACATAAAACTCTAGAGCTTTTTCCATTGTACCCGGAATTAGGCAGATGA 675 0.437 MGSMKVHQFTRGGFWEHEPLSLTLGCKRLRPLAPKLSNSNITTTTSTPFDLKSFIKPESGSTKLGSSYEDNKKDPPSPKDQVETHPGGTRWNPTQEQIRILEMLYRGGMRTPNTQKIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRKSLGLPLSPRSPTFTSSITFETTMGEVDQEDSPYKKCRSIAFQHLEEQNWLSCKEEEHKTLELFPLYPELGR* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1667 224 MobiDBLite consensus disorder prediction 36 52 - -
Lan6g1667 224 MobiDBLite consensus disorder prediction 36 95 - -
Lan6g1667 224 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Lan6g1667 224 Gene3D - 88 155 - -
Lan6g1667 224 SUPERFAMILY Homeodomain-like 85 154 IPR009057 -
Lan6g1667 224 CDD homeodomain 89 150 IPR001356 GO:0003677
Lan6g1667 224 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 221 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lan6g1667 224 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Lan6g1667 224 SMART HOX_1 86 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1667 Lan-Chr6 26374660 26376493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1667 4 172 Wox Gene Family AT1G46480 61.667 1.18e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan6g1667 Homeodomain 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1667 - - gmx:100781015 318.931