Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1666 ATGATCAGAAGCAGAAGCGAAAGCTCTACAGAGAAGAGAAAGCAACAAAGAGAGAAACAAATGAAACCATACTTTGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCGGAGATAAGAGAACCAAACAAGAGGTCAAGGATTTGGTTGGGTTCTTACACCACCCCTATAGCCGCCGCACGGGCCTACGACACCGCCGTGTTCTACCTCAGAGGACCTTCACCTAGACTTAACTTTCCGGAGTTACTGTTACAAGAGCAAGACGGCGACGTTTCGTTCAAGAGAGAGGATATGTCTGCTGATTCTATAAGGAAGAAAGCTACACAAGTTGGTGCTAGAGTTGATGCTTTGCAAACAGCACTTCATGCTTCTTCCAAGAACAATTCTACTTCTACCTATTCTTCCATGAAACCTGATTTGAATGAGTTTCCTAAACCTGATGAAGATTATTCCTTTGACCTTCAAGGTTGA 471 0.4416 MIRSRSESSTEKRKQQREKQMKPYFGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSPRLNFPELLLQEQDGDVSFKREDMSADSIRKKATQVGARVDALQTALHASSKNNSTSTYSSMKPDLNEFPKPDEDYSFDLQG* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1666 156 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lan6g1666 156 SUPERFAMILY DNA-binding domain 24 81 IPR016177 GO:0003677
Lan6g1666 156 MobiDBLite consensus disorder prediction 1 20 - -
Lan6g1666 156 PIRSF PTI6 2 154 IPR017392 GO:0003700
Lan6g1666 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 6 148 - -
Lan6g1666 156 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lan6g1666 156 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Lan6g1666 156 MobiDBLite consensus disorder prediction 120 156 - -
Lan6g1666 156 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lan6g1666 156 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
Lan6g1666 156 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Lan6g1666 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 6 148 - -
Lan6g1666 156 MobiDBLite consensus disorder prediction 120 138 - -
Lan6g1666 156 Pfam AP2 domain 26 72 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1666 Lan-Chr6 26345862 26346863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1666 1 130 AP2-EREBP Transcription Factor Family AT1G46768 62.774 4.10e-51 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan6g1666 AP2 1.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1666 K09286 - gmx:100801528 201.06